Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC002075.2-201ENST00000425207 252 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 RN7SL863P-201ENST00000462370 296 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 FO393415.2-201ENST00000480085 343 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AC078817.1-201ENST00000492623 435 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AC114801.2-201ENST00000503825 781 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 HSBP1P1-201ENST00000555205 166 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 MED28P6-201ENST00000558776 231 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 MIR5701-3-201ENST00000578890 82 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 MIR5701-1-201ENST00000585138 82 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AC002545.1-201ENST00000592511 181 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 MIR3976-201ENST00000606807 139 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 MIR5701-2-201ENST00000615634 82 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AL138825.1-201ENST00000618587 192 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 U2.1-201ENST00000618978 145 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AC048347.1-201ENST00000624621 427 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC004925.1-201ENST00000624256 2706 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 MTND5P7-201ENST00000413558 1798 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-874P-201ENST00000362390 105 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RNY1P16-201ENST00000363063 111 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-173P-201ENST00000364215 104 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 SNORD14.1-201ENST00000365609 90 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.424-201ENST00000384063 103 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-301P-201ENST00000384277 107 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-790P-201ENST00000384479 105 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AL513475.1-201ENST00000406602 315 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AL117339.3-201ENST00000418733 162 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 USP9YP16-201ENST00000430287 407 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 HIGD1AP2-201ENST00000446367 280 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 PCNPP5-201ENST00000452246 481 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 USP9YP23-201ENST00000455085 407 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RPL23AP14-201ENST00000468281 468 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC010285.1-201ENST00000470580 392 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC104564.1-201ENST00000493028 407 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC093852.1-201ENST00000503587 266 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-408P-201ENST00000515910 100 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 ACA59.1-201ENST00000515966 143 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC040926.1-201ENST00000530195 238 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC005476.1-201ENST00000554427 397 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 MIR4672-201ENST00000583126 81 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 SNRPGP15-201ENST00000600149 222 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 RPL12P50-201ENST00000603116 116 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
SLC44A3Q8N4M1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 MIR412-201ENST00000362142 91 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 RNY3P11-201ENST00000364153 102 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 SNORD56-201ENST00000413522 71 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 SETP5-201ENST00000437270 562 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 Z98949.2-201ENST00000440996 144 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 OSTCP8-201ENST00000445117 448 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC078918.1-201ENST00000498515 228 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 MLLT10P2-201ENST00000506434 249 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC005921.1-201ENST00000510589 286 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-1256P-201ENST00000516539 103 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC023157.2-201ENST00000540596 141 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 AC006023.2-201ENST00000609916 167 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 523 ms