Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SYNE4Q8N205 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SYNE4Q8N205 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SYNE4Q8N205 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 RNU5A-1-201ENST00000362698 116 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 RNY3P11-201ENST00000364153 102 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 Y_RNA.428-201ENST00000384078 102 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 Y_RNA.476-201ENST00000384347 108 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 MIR184-201ENST00000384962 84 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 AL138878.1-201ENST00000405131 347 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 AL591212.2-201ENST00000433923 257 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 RPL21P41-201ENST00000459863 264 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 AC092451.1-201ENST00000480211 153 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 AL049874.1-201ENST00000489560 388 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 SNORA31.3-201ENST00000516029 96 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 Y_RNA.680-201ENST00000516441 93 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 CYCSP27-201ENST00000527643 293 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 AC073476.4-201ENST00000628409 72 ntBASIC3.7□□□□□ -1.82
SYNE4Q8N205 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.7□□□□□ -1.82
SYNE4Q8N205 OR4G2P-202ENST00000641004 1759 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE4Q8N205 Y_RNA.48-201ENST00000362710 103 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 RNU1-115P-201ENST00000365329 160 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 SNORD6-201ENST00000365444 73 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 MIR517A-201ENST00000385001 87 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 RPL21P90-201ENST00000415692 466 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 RPL21P40-201ENST00000428586 483 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 HMGB1P9-201ENST00000429856 646 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 AL591704.1-201ENST00000432574 275 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC112492.4-201ENST00000456549 352 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC104564.1-201ENST00000493028 407 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 NDUFB4P9-201ENST00000511646 388 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 RNA5SP309-201ENST00000516670 106 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 RNU6-677P-201ENST00000516914 101 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 AL109918.3-201ENST00000603072 338 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 U2.1-201ENST00000618978 145 ntBASIC3.69□□□□□ -1.82
SYNE4Q8N205 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.69□□□□□ -1.82
SYNE4Q8N205 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SYNE4Q8N205 RNU6-600P-201ENST00000362524 99 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 Y_RNA.26-201ENST00000362539 101 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 RNU6-472P-201ENST00000384299 107 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 MIR514A1-201ENST00000385133 98 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 MIR607-201ENST00000385241 96 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 BX276092.3-201ENST00000424182 230 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 MYL8P-204ENST00000431574 518 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 RPL9P32-201ENST00000464118 620 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 SUMO2P6-201ENST00000505273 288 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 AC005921.1-201ENST00000510589 286 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 AC109446.1-201ENST00000566172 220 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 MIR4769-201ENST00000584126 77 ntBASIC3.68□□□□□ -1.82
SYNE4Q8N205 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SYNE4Q8N205 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SYNE4Q8N205 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SYNE4Q8N205 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SYNE4Q8N205 DEFB108F-201ENST00000344638 222 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RNU6-99P-201ENST00000364721 107 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RNU6-1329P-201ENST00000365664 107 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SYNE4Q8N205 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RNU2-23P-201ENST00000410545 195 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 CYCSP33-201ENST00000414485 327 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.67□□□□□ -1.82
SYNE4Q8N205 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 ARL5AP4-201ENST00000430731 512 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AL353997.1-201ENST00000432936 108 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RPL23AP50-201ENST00000434149 455 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RPL31P13-201ENST00000484151 370 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 RPL22P13-201ENST00000493291 347 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AC114801.2-201ENST00000503825 781 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AC022447.4-201ENST00000504053 364 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 AC104136.1-201ENST00000512969 394 ntBASIC3.67□□□□□ -1.82
SYNE4Q8N205 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms