Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC091951.2-201ENST00000500762 203 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC007536.1-201ENST00000533382 349 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC009163.5-201ENST00000575421 637 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AL391813.1-201ENST00000603098 260 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AL133393.1-201ENST00000603277 287 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 uc_338.5-201ENST00000611839 155 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC025253.1-201ENST00000613623 543 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC104260.1-201ENST00000616660 539 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.68□□□□□ -1.98
BEST3Q8N1M1 AC099654.7-201ENST00000635788 2127 ntBASIC2.68□□□□□ -1.98
BEST3Q8N1M1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC096644.4-201ENST00000563417 2912 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNU6-562P-201ENST00000362731 107 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 SNORD81.2-201ENST00000365153 76 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNU6-748P-201ENST00000384648 107 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 SNORD73A-201ENST00000386062 65 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNU6-1009P-201ENST00000390996 107 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AL117339.3-201ENST00000418733 162 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 PDCL2P1-201ENST00000419302 352 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 NCOR1P3-201ENST00000420479 303 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 SNAP23P1-201ENST00000433229 246 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC105272.1-201ENST00000438604 198 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC012308.1-201ENST00000451232 178 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC013470.1-201ENST00000453438 462 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 MED28P2-201ENST00000475771 317 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RN7SL633P-201ENST00000488974 297 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC008526.1-201ENST00000509149 338 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC092436.3-201ENST00000511788 257 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RAC1P5-201ENST00000512182 576 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNA5SP356-201ENST00000515972 94 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNU6-875P-201ENST00000516488 106 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC010186.2-204ENST00000537668 439 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 SCOCP1-201ENST00000554676 349 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BEST3Q8N1M1 ELOCP29-201ENST00000588193 334 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AL670379.10-201ENST00000604330 253 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AL670379.9-201ENST00000605428 253 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC069234.5-201ENST00000611056 416 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC063943.3-201ENST00000615562 356 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 UCA1.1-201ENST00000620952 75 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC005858.4-201ENST00000623191 700 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 MIR3529-201ENST00000637713 78 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 AC080100.1-201ENST00000624239 5356 ntBASIC2.67□□□□□ -1.98
BEST3Q8N1M1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNU6-827P-201ENST00000365553 106 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 SNORD116-20-201ENST00000384529 92 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 SAR1AP2-201ENST00000392696 594 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AL445529.1-201ENST00000398713 389 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 SNORA11.2-201ENST00000408318 127 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RPS15AP10-201ENST00000432472 382 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AL645568.3-201ENST00000433683 316 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 OSTCP8-201ENST00000445117 448 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RPS29P12-201ENST00000460178 152 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC107626.1-201ENST00000471084 183 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RPS26P21-201ENST00000475397 348 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 MTCO1P29-201ENST00000496868 288 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC096745.1-201ENST00000509945 370 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RN7SKP132-201ENST00000516001 208 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNU6-566P-201ENST00000516790 107 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNU6-1088P-201ENST00000516850 104 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNU6-273P-201ENST00000516937 96 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RNA5SP454-201ENST00000517231 127 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC006023.1-201ENST00000603944 259 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 ELOCP5-201ENST00000604924 333 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 uc_338.15-201ENST00000615470 191 ntBASIC2.66□□□□□ -1.98
BEST3Q8N1M1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
BEST3Q8N1M1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
BEST3Q8N1M1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
BEST3Q8N1M1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.65□□□□□ -1.98
BEST3Q8N1M1 RNU6-527P-201ENST00000363425 104 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.142-201ENST00000363491 102 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms