Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AP001324.2-201ENST00000461163 319 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SIX5Q8N196 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX5Q8N196 AC146944.2-203ENST00000502493 354 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 AC139495.1-202ENST00000513164 354 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 AP005660.1-201ENST00000522972 293 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 AL357075.2-201ENST00000614906 189 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 AC048347.1-201ENST00000624621 427 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX5Q8N196 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX5Q8N196 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 AC004944.1-201ENST00000517807 3059 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SIX5Q8N196 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX5Q8N196 AC073073.2-201ENST00000609827 2578 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX5Q8N196 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX5Q8N196 AC002543.1-201ENST00000299783 1954 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX5Q8N196 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SIX5Q8N196 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX5Q8N196 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX5Q8N196 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SIX5Q8N196 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX5Q8N196 AL109809.4-201ENST00000603520 2185 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX5Q8N196 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX5Q8N196 Y_RNA.233-201ENST00000364407 101 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 RNU6-923P-201ENST00000364753 107 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 AL356095.1-201ENST00000417217 199 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX5Q8N196 AC107626.1-201ENST00000471084 183 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 RPS4XP13-201ENST00000483219 789 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 IGKV2-38-201ENST00000517443 247 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX5Q8N196 AC233702.2-202ENST00000562547 291 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 AC140479.6-201ENST00000633535 357 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
SIX5Q8N196 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX5Q8N196 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX5Q8N196 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SIX5Q8N196 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.56□□□□□ -1.68
SIX5Q8N196 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX5Q8N196 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX5Q8N196 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX5Q8N196 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
SIX5Q8N196 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX5Q8N196 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SIX5Q8N196 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX5Q8N196 RNU6-525P-201ENST00000363685 104 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 RNU6-213P-201ENST00000384051 104 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 RNU6-622P-201ENST00000384272 103 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 Y_RNA.498-201ENST00000384460 102 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 Y_RNA.597-201ENST00000410463 100 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 RN7SKP53-201ENST00000411337 315 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX5Q8N196 RPL23AP83-201ENST00000434984 473 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX5Q8N196 RPL23AP52-201ENST00000439311 478 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 RPS29P7-201ENST00000439662 171 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX5Q8N196 AC010469.1-201ENST00000463864 576 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AC091021.1-201ENST00000468051 388 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AC074133.1-201ENST00000515696 183 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 RPL23AP53-201ENST00000521854 457 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 HIGD1AP1-201ENST00000550979 275 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 MZT1P2-201ENST00000604387 248 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AL162713.1-201ENST00000604480 262 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AC011921.3-201ENST00000605540 361 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AC022441.3-201ENST00000605737 136 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 AC021753.1-201ENST00000635724 168 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 U6.106-201ENST00000636360 105 ntBASIC4.55□□□□□ -1.68
SIX5Q8N196 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX5Q8N196 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX5Q8N196 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX5Q8N196 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX5Q8N196 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX5Q8N196 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SIX5Q8N196 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX5Q8N196 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SIX5Q8N196 AC092593.1-201ENST00000515413 1815 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SIX5Q8N196 RNA5SP197-201ENST00000363357 119 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 RNU6-793P-201ENST00000384233 104 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 MIR200C-201ENST00000384980 68 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AL512633.1-201ENST00000399931 655 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 RNU6ATAC-201ENST00000408749 126 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AL160275.2-201ENST00000412010 394 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIX5Q8N196 AC024067.1-201ENST00000426199 223 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 HMGB1P37-201ENST00000439613 609 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AL161651.1-201ENST00000440882 223 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX5Q8N196 AC090525.1-201ENST00000479116 478 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 RNU1-61P-201ENST00000516107 151 ntBASIC4.54□□□□□ -1.68
SIX5Q8N196 SNORA31.16-201ENST00000516773 139 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms