Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU7-30P-201ENST00000516835 62 ntBASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 AC009994.1-201ENST00000606889 253 ntBASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRT28Q7Z3Y7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
KRT28Q7Z3Y7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 RNA5SP99-201ENST00000364020 114 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-166P-201ENST00000384371 107 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AL079342.1-201ENST00000401460 267 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 RN7SKP32-201ENST00000410167 303 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 CYCSP33-201ENST00000414485 327 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 MTATP6P7-201ENST00000453315 681 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC010099.1-201ENST00000455434 375 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC091179.1-201ENST00000461606 579 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC087884.1-201ENST00000469738 328 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC117503.1-201ENST00000472241 394 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-703P-201ENST00000516946 107 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC026464.5-201ENST00000562497 722 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC005261.5-201ENST00000596280 355 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC078899.3-201ENST00000599065 212 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 AC046143.2-201ENST00000609789 160 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 MTND5P7-201ENST00000413558 1798 ntBASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KRT28Q7Z3Y7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AC093831.2-201ENST00000624393 3427 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 SNORD114-1-201ENST00000362705 72 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-778P-201ENST00000363269 103 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-254P-201ENST00000363377 107 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU2-3P-201ENST00000410144 191 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 PDCL2P1-201ENST00000419302 352 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 SNRPEP8-201ENST00000442866 260 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-329P-201ENST00000459618 107 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AC011005.2-201ENST00000487324 359 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RPS29P20-201ENST00000489592 171 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 TRBVA-201ENST00000498804 316 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNA5SP281-201ENST00000516504 135 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AC087854.1-201ENST00000519706 414 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 NACAP3-201ENST00000552100 481 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 MIR4742-201ENST00000581069 85 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 MIR5692C1-201ENST00000585309 91 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 U2.21-201ENST00000637295 81 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 AP006437.1-201ENST00000641440 3685 ntBASIC3.39□□□□□ -1.87
KRT28Q7Z3Y7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 Y_RNA.142-201ENST00000363491 102 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 SNORD14B-201ENST00000364533 90 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-384P-201ENST00000364900 104 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-198P-201ENST00000384258 104 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 SKA2P1-201ENST00000425592 390 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 snoU109.2-201ENST00000459316 135 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 RPL23AP45-201ENST00000476406 468 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AC132942.1-201ENST00000486753 483 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 SNORA25.17-201ENST00000517184 124 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AL391261.3-201ENST00000557194 520 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 LINC00933-203ENST00000559812 219 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AC091135.1-201ENST00000585943 307 ntBASIC3.38□□□□□ -1.87
KRT28Q7Z3Y7 AC243960.4-201ENST00000600532 288 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms