Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RNA5SP322-201ENST00000363617 119 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.439-201ENST00000384119 94 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RNU6-72P-201ENST00000384285 79 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RPL21P75-201ENST00000396599 483 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RPL21P28-201ENST00000401418 483 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RNU6-121P-201ENST00000410525 99 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AL590556.1-201ENST00000423231 483 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC139712.2-201ENST00000424302 339 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RPL21P39-201ENST00000463605 483 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC087190.1-201ENST00000484462 480 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC107032.1-201ENST00000485945 480 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC132942.1-201ENST00000486753 483 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC093591.1-201ENST00000491435 481 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RPL21P16-201ENST00000495531 483 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC005921.1-201ENST00000510589 286 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AC012493.2-201ENST00000595083 291 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 MIR376A1-201ENST00000616574 68 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 AP000553.6-201ENST00000641242 118 ntBASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF40BQ6NWY9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-527P-201ENST00000363425 104 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 SNORA38.1-201ENST00000364172 131 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 RNA5SP167-201ENST00000365461 116 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.458-201ENST00000384240 102 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.518-201ENST00000384552 113 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 RNA5SP424-201ENST00000390988 115 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 RPS29P13-201ENST00000402041 169 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 SDAD1P3-201ENST00000427380 333 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AL590664.1-201ENST00000448065 339 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AC006026.2-201ENST00000457376 180 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AP000873.1-201ENST00000463987 400 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 RN7SKP272-201ENST00000516988 232 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-111P-201ENST00000517179 105 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AC025946.2-201ENST00000603398 234 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 U6.92-201ENST00000636464 89 ntBASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF40BQ6NWY9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC009541.1-201ENST00000438279 2662 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.84-201ENST00000363011 104 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.416-201ENST00000384014 113 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 MIR325-201ENST00000385260 98 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-1203P-201ENST00000410703 110 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 RPL21P40-201ENST00000428586 483 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AL645939.1-201ENST00000453429 797 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 S100A11P1-201ENST00000477525 312 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC025518.1-201ENST00000479856 347 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC098869.1-201ENST00000481627 292 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 FTH1P9-201ENST00000513251 355 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 MIR2355-201ENST00000517199 87 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 RN7SKP289-201ENST00000517244 295 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC020914.4-201ENST00000597690 277 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AC136601.2-201ENST00000604356 474 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 AL365434.2-201ENST00000607979 234 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF40BQ6NWY9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 AC233981.2-201ENST00000611524 1614 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 AL391987.6-201ENST00000305671 199 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-600P-201ENST00000362524 99 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RNU4-35P-201ENST00000362588 141 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-200P-201ENST00000364743 107 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RNU4-61P-201ENST00000411243 107 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 DBIP2-201ENST00000419076 262 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 VDAC1P3-201ENST00000434069 851 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 MTND2P29-201ENST00000438595 412 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RN7SL93P-201ENST00000463035 293 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 TOMM22P6-201ENST00000465035 409 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 AC010469.2-201ENST00000496412 480 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 ANXA2P1-201ENST00000505539 926 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-138P-201ENST00000515952 107 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 SYF2P1-201ENST00000550658 413 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms