Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC233702.2-202ENST00000562547 291 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC022655.2-201ENST00000577280 318 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 MIR5692C2-201ENST00000577959 77 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 MIR5685-201ENST00000579080 79 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC002545.1-201ENST00000592511 181 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 AL606490.9-201ENST00000603331 271 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC006001.4-201ENST00000622243 395 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 SCARNA4-201ENST00000629045 128 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF43Q68DV7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF43Q68DV7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF43Q68DV7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 RNU6-151P-201ENST00000364158 107 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 Y_RNA.217-201ENST00000364214 105 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 RNU6-1325P-201ENST00000364905 105 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 RNU6-1175P-201ENST00000365200 107 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 MIR32-201ENST00000384965 70 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF43Q68DV7 AL357075.1-201ENST00000404107 726 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 AC010154.1-201ENST00000425857 269 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 RPL23AP46-201ENST00000438548 490 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 Y_RNA.641-201ENST00000459414 105 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 RPS29P19-201ENST00000479709 171 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 RPL21P13-201ENST00000488305 481 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 RNU6-567P-201ENST00000516746 107 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 HSPE1P5-201ENST00000561489 272 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 Y_RNA.778-201ENST00000620203 90 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 MIR7702-201ENST00000621931 59 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 AC012442.3-202ENST00000636742 206 ntBASIC4.26□□□□□ -1.73
RNF43Q68DV7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF43Q68DV7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF43Q68DV7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF43Q68DV7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF43Q68DV7 RNU1-139P-201ENST00000391307 165 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 AL353705.4-201ENST00000449661 238 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF43Q68DV7 snoU13.3-201ENST00000459441 104 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 HSPE1P6-201ENST00000479457 291 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 RNU6-1333P-201ENST00000516162 93 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF43Q68DV7 AC022968.1-201ENST00000567372 442 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 AL133393.1-201ENST00000603277 287 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 RMST_6.1-201ENST00000611980 203 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 MIR486-1-201ENST00000612171 68 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 AL353748.2-201ENST00000622148 471 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 AL592437.2-201ENST00000421655 2434 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF43Q68DV7 OR4G2P-202ENST00000641004 1759 ntBASIC4.25□□□□□ -1.73
RNF43Q68DV7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 AC009541.1-201ENST00000438279 2662 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF43Q68DV7 AC009812.4-201ENST00000569134 1805 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 Y_RNA.127-201ENST00000363386 109 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RNU6-961P-201ENST00000363893 105 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RNU4-84P-201ENST00000364200 139 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 Y_RNA.218-201ENST00000364218 104 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RNU6-312P-201ENST00000364629 107 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 Y_RNA.331-201ENST00000365267 102 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 Y_RNA.357-201ENST00000365487 109 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RNU6-968P-201ENST00000384076 107 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 AL390729.2-201ENST00000416137 156 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 AL512844.2-201ENST00000433990 593 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 SEPT7P4-201ENST00000437076 306 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 AC006011.1-201ENST00000442758 349 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 AL500522.2-201ENST00000448562 343 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 IFNWP4-201ENST00000453148 294 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 AL049874.1-201ENST00000489560 388 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RNU6-1114P-201ENST00000516022 107 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RN7SKP49-201ENST00000516675 260 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RNU6-971P-201ENST00000516920 106 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 MIR3684-201ENST00000579779 74 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 AC012468.1-201ENST00000604888 430 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 SNORA51-201ENST00000606420 132 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 AC012314.7-201ENST00000619693 93 ntBASIC4.24□□□□□ -1.73
RNF43Q68DV7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF43Q68DV7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms