Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 CASP1P1-201ENST00000526345 212 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 AC093023.1-201ENST00000547375 507 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 LINC00933-203ENST00000559812 219 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 ZNF192P1-203ENST00000565888 810 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 AC012433.1-201ENST00000588916 398 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 MIR7851-201ENST00000610611 160 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 LINC02471-203ENST00000641941 4752 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.84-201ENST00000363011 104 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.117-201ENST00000363294 101 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 RNU6-200P-201ENST00000364743 107 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 RNU6-708P-201ENST00000384217 107 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.477-201ENST00000384352 108 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 SNORD17-201ENST00000390930 237 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 SNORD115-46-201ENST00000390982 71 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 RAC1P3-201ENST00000416129 580 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 EIF1AXP1-201ENST00000419267 435 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AL591043.1-201ENST00000432461 424 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 snoU109.2-201ENST00000459316 135 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.673-201ENST00000516306 88 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AC090281.1-201ENST00000523019 276 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AP004242.1-201ENST00000533701 349 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 CYCSP39-201ENST00000565821 309 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 AC012493.2-201ENST00000595083 291 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 MIR7112-201ENST00000616126 65 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 USP8P1-201ENST00000494673 3183 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 LINC02555-201ENST00000563933 1951 ntBASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
USPL1Q5W0Q7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.105-201ENST00000363182 111 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 RNU6-217P-201ENST00000384164 104 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.785-201ENST00000384290 109 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 RNU2-71P-201ENST00000411395 189 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 RPL26P27-201ENST00000414397 437 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 RPL21P38-201ENST00000418090 167 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 AL590135.1-201ENST00000422215 156 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 snoU13.30-201ENST00000458951 104 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 TRBV12-2-201ENST00000489763 344 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 SYF2P1-201ENST00000550658 413 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 AC090617.3-201ENST00000573670 475 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.772-201ENST00000606692 102 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 FTX_3.1-201ENST00000610451 147 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 U4.6-201ENST00000621618 127 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 SCARNA4-201ENST00000629045 128 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 U6.92-201ENST00000636464 89 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 AC018529.3-201ENST00000624212 2254 ntBASIC4.55□□□□□ -1.68
USPL1Q5W0Q7 AC233981.2-201ENST00000611524 1614 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 RNU6-600P-201ENST00000362524 99 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 MRPL35P1-201ENST00000404272 572 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 RPL21P40-201ENST00000428586 483 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 RPL23AP22-201ENST00000437556 453 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 AC010469.2-201ENST00000496412 480 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 HMGB1P35-201ENST00000503360 598 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 SNORA43.2-201ENST00000516652 128 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 RNU6-1183P-201ENST00000517054 60 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 AL356157.2-201ENST00000605122 111 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 MIR486-1-201ENST00000612171 68 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 AP001282.2-201ENST00000616149 309 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 MIR376A1-201ENST00000616574 68 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 AC091903.1-201ENST00000624322 454 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 SCARNA15.3-201ENST00000626315 122 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 SCARNA4.1-201ENST00000628597 123 ntBASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
USPL1Q5W0Q7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms