Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 RNU6-525P-201ENST00000363685 104 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 RNU6-105P-201ENST00000363909 104 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 RNU6-166P-201ENST00000384371 107 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 RNU6-381P-201ENST00000391259 108 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 RN7SKP167-201ENST00000411047 285 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 SNORA31.19-201ENST00000517079 126 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 YPEL5P3-201ENST00000547227 352 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 LINC00901.1-201ENST00000617252 152 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 AC048347.1-201ENST00000624621 427 ntBASIC5.17□□□□□ -1.58
RC3H1Q5TC82 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 SNORA5A-201ENST00000384111 134 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 RNU6-1144P-201ENST00000384247 104 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 RNU6-578P-201ENST00000390980 103 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 snoU109.2-201ENST00000459316 135 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 RN7SKP179-201ENST00000516126 217 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 MIR4744-201ENST00000581563 82 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 AL353748.2-201ENST00000622148 471 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 AC241585.2-209ENST00000638217 143 ntBASIC5.16□□□□□ -1.58
RC3H1Q5TC82 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RC3H1Q5TC82 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RC3H1Q5TC82 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
RC3H1Q5TC82 SAGE2P-201ENST00000420011 2126 ntBASIC5.15□□□□□ -1.58
RC3H1Q5TC82 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.15□□□□□ -1.58
RC3H1Q5TC82 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.15□□□□□ -1.58
RC3H1Q5TC82 SNORA72.2-201ENST00000365028 127 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 RNA5SP22-201ENST00000365393 109 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 U8.10-201ENST00000384260 133 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 SNORA3.3-201ENST00000408712 125 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 RPL36AP10-201ENST00000421785 322 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 AC091390.3-201ENST00000426478 338 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 AC007560.1-201ENST00000426912 237 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 RNU7-197P-201ENST00000458836 62 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 AC100767.1-201ENST00000528178 123 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 AC092628.2-201ENST00000622492 339 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.15□□□□□ -1.59
RC3H1Q5TC82 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RC3H1Q5TC82 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 SNORA22-201ENST00000383907 134 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 RNU6-147P-201ENST00000383983 107 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 SNORA29-201ENST00000384183 140 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 RNU6-1248P-201ENST00000391096 64 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AL451050.1-201ENST00000450126 415 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 snoU13.24-201ENST00000458998 104 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 Y_RNA.637-201ENST00000459424 114 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AL121594.1-201ENST00000475906 575 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AL049874.1-201ENST00000489560 388 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AC108145.1-201ENST00000503770 153 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 RN7SKP164-201ENST00000516138 266 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 RNU6-58P-201ENST00000517143 103 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AC025627.2-201ENST00000576220 160 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 MIR4458-201ENST00000578872 75 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AL357075.2-201ENST00000614906 189 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AL391261.4-201ENST00000616012 481 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AC012314.7-201ENST00000619693 93 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AL034408.1-202ENST00000636088 415 ntBASIC5.14□□□□□ -1.59
RC3H1Q5TC82 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RC3H1Q5TC82 MTND5P32-201ENST00000560711 1802 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 RNU6-103P-201ENST00000363686 107 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 Y_RNA.337-201ENST00000365312 102 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 MIR34B-201ENST00000385076 84 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 RPL21P17-201ENST00000397467 475 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 AC092798.1-201ENST00000458542 409 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 RNA5SP76-201ENST00000516277 87 ntBASIC5.13□□□□□ -1.59
RC3H1Q5TC82 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 MIR6715B-201ENST00000637172 77 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms