Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 BX276092.3-201ENST00000424182 230 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AL513185.2-201ENST00000425543 193 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC38Q502W7 USP9YP28-201ENST00000435142 589 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC097462.2-201ENST00000504623 481 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AK3P2-201ENST00000507976 429 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC109329.1-201ENST00000518744 317 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC38Q502W7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC38Q502W7 ELOCP31-201ENST00000540463 467 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC004486.1-201ENST00000546846 233 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC103996.1-201ENST00000555468 102 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC105137.2-201ENST00000569073 466 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 MIR3199-1-201ENST00000582434 88 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 MIR3670-2-201ENST00000582974 65 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 MIR3670-1-201ENST00000584160 65 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC38Q502W7 MIR3670-3-201ENST00000584855 65 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 MIR3670-4-201ENST00000612260 65 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AL355596.1-201ENST00000565399 3996 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 AL365361.1-201ENST00000566942 3481 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 SNORA54-201ENST00000384281 123 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 AL139095.1-201ENST00000404326 391 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 AL451074.5-201ENST00000415894 435 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 RPS15AP10-201ENST00000432472 382 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 RPS29P6-201ENST00000438196 145 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 MTCO3P18-201ENST00000440206 761 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 RBMX2P4-201ENST00000441256 376 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 AC008628.2-201ENST00000502605 298 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 RNU6-1332P-201ENST00000516666 104 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 MIR3117-201ENST00000584034 78 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 AC097372.5-201ENST00000623665 376 ntBASIC3.05□□□□□ -1.92
CCDC38Q502W7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCDC38Q502W7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC38Q502W7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC38Q502W7 MTND4P27-201ENST00000450813 1354 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 OR56A5-201ENST00000340110 738 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 MIR22-201ENST00000362190 85 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL445529.1-201ENST00000398713 389 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 U6atac.2-201ENST00000408644 118 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 RNU6-293P-201ENST00000411259 106 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 VN1R36P-201ENST00000414936 291 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL139413.1-201ENST00000421309 217 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 RPL30P4-201ENST00000429309 333 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC096576.1-201ENST00000489014 359 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC090616.3-201ENST00000582184 217 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL356280.1-201ENST00000603614 379 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 RBM11P1-201ENST00000604951 799 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 RPL23AP88-201ENST00000605759 454 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC005046.1-201ENST00000608515 625 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC093913.1-201ENST00000614178 329 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL136221.1-201ENST00000621449 509 ntBASIC3.04□□□□□ -1.92
CCDC38Q502W7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC38Q502W7 AC002543.1-201ENST00000299783 1954 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 RPL9P7-201ENST00000330965 580 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 MIR218-1-201ENST00000384999 110 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 FGF7P8-201ENST00000402994 292 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AL356776.1-201ENST00000406574 447 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 RNU6-1148P-201ENST00000410992 104 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 MTND1P23-201ENST00000416931 372 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC243964.1-201ENST00000441814 261 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC080013.2-201ENST00000460866 323 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC018710.1-201ENST00000506509 158 ntBASIC3.03□□□□□ -1.92
CCDC38Q502W7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms