Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNA5SP499-201ENST00000363982 119 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 RNU6-575P-201ENST00000411326 105 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 TPMTP2-201ENST00000414372 726 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 COX7BP2-201ENST00000437976 242 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 RNU6-165P-201ENST00000517170 99 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 VN1R83P-201ENST00000595685 445 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AC068790.6-201ENST00000602558 258 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AL590229.1-201ENST00000603497 542 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AC106858.1-201ENST00000637497 429 ntBASIC0.35□□□□□ -2.35
CCDC58Q4VC31 AL391994.1-201ENST00000254724 282 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 Y_RNA.124-201ENST00000363339 93 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 RNU4-12P-201ENST00000365233 139 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 SNORD12-201ENST00000391002 90 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 MTCYBP15-201ENST00000433123 1127 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC092427.1-201ENST00000439177 601 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 MED28P2-201ENST00000475771 317 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC093809.1-201ENST00000509155 340 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 RN7SKP258-201ENST00000517151 304 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC087897.1-201ENST00000550134 156 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC091489.2-201ENST00000566263 604 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC58Q4VC31 MIR1264-201ENST00000616374 69 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
CCDC58Q4VC31 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 RNU6-432P-201ENST00000384196 109 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 SNRPFP3-201ENST00000457792 225 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 RNU6-333P-201ENST00000459117 107 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AC104629.1-201ENST00000494226 508 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AL121579.1-201ENST00000555129 305 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AP001981.2-201ENST00000603241 418 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
CCDC58Q4VC31 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.33□□□□□ -2.36
CCDC58Q4VC31 SNRPEP3-201ENST00000338402 276 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 RNU4-79P-201ENST00000362764 141 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 RNU6-942P-201ENST00000363002 107 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AC002429.1-201ENST00000437672 148 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 MTND4P6-201ENST00000438297 472 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AL078601.1-201ENST00000444542 271 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC58Q4VC31 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC58Q4VC31 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AC108729.3-201ENST00000513484 108 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 SNORA31.4-201ENST00000516049 129 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 RN7SKP49-201ENST00000516675 260 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 MIR4714-201ENST00000580728 77 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AL512605.2-201ENST00000592972 256 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC58Q4VC31 AC069114.2-201ENST00000604699 304 ntBASIC0.32□□□□□ -2.36
CCDC58Q4VC31 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC104651.1-201ENST00000427559 735 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC58Q4VC31 GTF2IP12-201ENST00000456547 356 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC58Q4VC31 MTCO3P42-201ENST00000509488 518 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 MTCO3P39-201ENST00000514812 518 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC103833.1-201ENST00000517442 172 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AL590705.4-201ENST00000532209 134 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AL158163.2-201ENST00000619110 700 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC099654.9-201ENST00000637055 678 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 AC010615.1-201ENST00000594254 1764 ntBASIC0.31□□□□□ -2.36
CCDC58Q4VC31 RNU6-97P-201ENST00000363387 104 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 RNU6-487P-201ENST00000365430 104 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 RNU6-945P-201ENST00000383947 107 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 RNU6-114P-201ENST00000384704 105 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 RNU6-910P-201ENST00000390844 107 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC58Q4VC31 RNU7-140P-201ENST00000459546 60 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 AC098869.1-201ENST00000481627 292 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 RNU6-572P-201ENST00000516724 80 ntBASIC0.3□□□□□ -2.36
CCDC58Q4VC31 SNORD60.2-201ENST00000516883 86 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms