Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.41□□□□□ -2.48
TFF3Q07654 RAC1P8-201ENST00000427086 527 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 RPS29P8-201ENST00000445109 171 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AL606662.1-201ENST00000445763 553 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 MEMO1P3-201ENST00000459811 302 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AL049830.1-201ENST00000468034 425 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AC093534.1-201ENST00000504977 132 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 HSPA8P13-201ENST00000523715 472 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.41□□□□□ -2.48
TFF3Q07654 AC013468.1-201ENST00000608680 598 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AL353149.1-201ENST00000610667 244 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 AP000943.4-201ENST00000622912 357 ntBASIC-0.41□□□□□ -2.48
TFF3Q07654 RNU6-697P-201ENST00000363348 107 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 RNU6-217P-201ENST00000384164 104 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 RNU6-39P-201ENST00000384344 107 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 RNU6-360P-201ENST00000390944 104 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 RN7SKP142-201ENST00000411236 328 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.42□□□□□ -2.48
TFF3Q07654 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.42□□□□□ -2.48
TFF3Q07654 AC004865.1-201ENST00000442276 1003 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.42□□□□□ -2.48
TFF3Q07654 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.42□□□□□ -2.48
TFF3Q07654 MTND1P22-201ENST00000510572 951 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 SNORA31.4-201ENST00000516049 129 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.42□□□□□ -2.48
TFF3Q07654 AL592221.1-201ENST00000605266 382 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 AL355802.4-201ENST00000607635 548 ntBASIC-0.42□□□□□ -2.48
TFF3Q07654 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
TFF3Q07654 AC092447.10-201ENST00000620607 1652 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 RNA5SP128-201ENST00000365305 116 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 MTND4LP11-201ENST00000422184 280 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 AL590383.1-201ENST00000428602 75 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.43□□□□□ -2.48
TFF3Q07654 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.43□□□□□ -2.48
TFF3Q07654 MIR4504-201ENST00000577413 92 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 AL583856.2-201ENST00000606298 543 ntBASIC-0.43□□□□□ -2.48
TFF3Q07654 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
TFF3Q07654 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.44□□□□□ -2.48
TFF3Q07654 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.44□□□□□ -2.48
TFF3Q07654 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.44□□□□□ -2.48
TFF3Q07654 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.44□□□□□ -2.48
TFF3Q07654 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
TFF3Q07654 HMGN1P12-201ENST00000499125 195 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.44□□□□□ -2.48
TFF3Q07654 SMURF2P1-201ENST00000514992 481 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 RNU6-491P-201ENST00000516099 110 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 RNU6-667P-201ENST00000517186 102 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.44□□□□□ -2.48
TFF3Q07654 TRAV32-201ENST00000553993 340 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 AC005951.2-201ENST00000576282 495 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 MIR548Y-201ENST00000582739 110 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 AC073410.2-201ENST00000603240 332 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 AC012557.2-201ENST00000605919 418 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 AC004775.1-201ENST00000607389 753 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 AP005229.2-201ENST00000609980 697 ntBASIC-0.44□□□□□ -2.48
TFF3Q07654 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
TFF3Q07654 MIR103A1-201ENST00000362165 78 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 RNA5SP214-201ENST00000363378 118 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 RNU6-112P-201ENST00000363599 104 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 SNORD49B-201ENST00000365172 72 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.45□□□□□ -2.48
TFF3Q07654 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AC078974.1-201ENST00000411597 223 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AC093422.3-201ENST00000428506 305 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC-0.45□□□□□ -2.48
TFF3Q07654 DAP3P1-201ENST00000441522 278 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AP1S2P1-201ENST00000457344 379 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 VPS26AP1-201ENST00000483197 979 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 SNORD79.1-201ENST00000516069 84 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 ZNF705CP-201ENST00000530515 889 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.45□□□□□ -2.48
TFF3Q07654 MIR1295B-201ENST00000636144 60 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AC068205.3-201ENST00000636385 468 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 MTND5P16-201ENST00000460269 1703 ntBASIC-0.45□□□□□ -2.48
TFF3Q07654 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.45□□□□□ -2.48
TFF3Q07654 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 RNU6-910P-201ENST00000390844 107 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 RPS26P42-201ENST00000413485 326 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 AL589872.1-201ENST00000426602 288 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.46□□□□□ -2.48
TFF3Q07654 C8orf59P1-201ENST00000429930 303 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.46□□□□□ -2.48
TFF3Q07654 AC243964.1-201ENST00000441814 261 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 RPL22P13-201ENST00000493291 347 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 RNU6-1004P-201ENST00000516584 111 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 RNU6-165P-201ENST00000517170 99 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 AC104417.1-201ENST00000523974 751 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.46□□□□□ -2.48
TFF3Q07654 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.46□□□□□ -2.48
TFF3Q07654 AL365434.2-201ENST00000607979 234 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.46□□□□□ -2.48
TFF3Q07654 RNU6-163P-201ENST00000384396 106 ntBASIC-0.47□□□□□ -2.48
TFF3Q07654 RNU6-950P-201ENST00000384651 107 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms