Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC090517.3-201ENST00000625170 141 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AC233981.2-201ENST00000611524 1614 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
CCNA1P78396 RNU6-655P-201ENST00000362858 107 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 RNU6-511P-201ENST00000363496 107 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 RNU4-28P-201ENST00000364739 141 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 SNORD14D-201ENST00000384390 87 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 RNU11-3P-201ENST00000391111 133 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 RN7SKP101-201ENST00000411376 320 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 AP000275.1-201ENST00000411943 390 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.82□□□□□ -2.12
CCNA1P78396 SRIP3-201ENST00000413200 219 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 UBE2V1P10-201ENST00000414685 269 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 AC092809.3-201ENST00000415453 231 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 BX510359.4-201ENST00000423750 193 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNA1P78396 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 RPL37P21-201ENST00000435890 276 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNA1P78396 RNU6-201P-201ENST00000517100 61 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 SNORA31.23-201ENST00000517219 133 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 CR383656.8-201ENST00000549046 145 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNA1P78396 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNA1P78396 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.82□□□□□ -2.12
CCNA1P78396 AC234772.3-201ENST00000602277 528 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 AC121334.2-201ENST00000605387 271 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.82□□□□□ -2.12
CCNA1P78396 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.82□□□□□ -2.12
CCNA1P78396 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCNA1P78396 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCNA1P78396 MIR412-201ENST00000362142 91 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 RNU6-533P-201ENST00000384144 107 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC011233.1-201ENST00000422812 283 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.81□□□□□ -2.12
CCNA1P78396 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 SNRPGP9-201ENST00000456025 225 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AC112492.4-201ENST00000456549 352 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 PPP1R2P5-201ENST00000457256 603 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNA1P78396 AF131216.2-201ENST00000512316 564 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AC011979.2-201ENST00000527568 352 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AC022616.8-201ENST00000533569 253 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNA1P78396 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC105129.3-201ENST00000605455 485 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AP000240.1-201ENST00000609910 452 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CCNA1P78396 AC130324.3-201ENST00000614165 542 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 AC093648.1-201ENST00000623546 606 ntBASIC1.81□□□□□ -2.12
CCNA1P78396 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCNA1P78396 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
CCNA1P78396 FARSBP1-201ENST00000435808 1778 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CCNA1P78396 Y_RNA.269-201ENST00000364685 89 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 MIR29B2-201ENST00000385055 81 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 MTCYBP36-201ENST00000404146 440 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 HIGD1AP15-201ENST00000416198 280 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AC016831.2-201ENST00000417179 352 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNA1P78396 AL365338.1-201ENST00000422282 858 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 USP9YP18-201ENST00000425912 695 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNA1P78396 PRELID3BP1-201ENST00000457142 540 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNA1P78396 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNA1P78396 PTP4A1P4-201ENST00000512479 322 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNA1P78396 RN7SKP265-201ENST00000516448 223 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 SNORA31.24-201ENST00000517232 57 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.8□□□□□ -2.12
CCNA1P78396 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.8□□□□□ -2.12
CCNA1P78396 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AC090897.2-201ENST00000581715 130 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AL022345.1-201ENST00000607292 135 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AC104010.1-201ENST00000616889 150 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 AL445523.1-201ENST00000451184 1362 ntBASIC1.8□□□□□ -2.12
CCNA1P78396 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CCNA1P78396 ZNF209P-201ENST00000593450 2304 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 RNU6-1210P-201ENST00000363775 107 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 RNU6-960P-201ENST00000364056 120 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 RNU6-501P-201ENST00000364072 100 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 RNU6-392P-201ENST00000364926 101 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 RNU5E-6P-201ENST00000365574 115 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 Y_RNA.623-201ENST00000411128 95 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCNA1P78396 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.79□□□□□ -2.12
CCNA1P78396 AL593851.1-201ENST00000426171 157 ntBASIC1.79□□□□□ -2.12
CCNA1P78396 AL365184.2-201ENST00000431139 435 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms