Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.37□□□□□ -2.35
RPS28P62857 RNU6-1176P-201ENST00000390955 107 ntBASIC0.37□□□□□ -2.35
RPS28P62857 SNORA67.5-201ENST00000391036 107 ntBASIC0.37□□□□□ -2.35
RPS28P62857 RN7SKP223-201ENST00000410582 62 ntBASIC0.37□□□□□ -2.35
RPS28P62857 MTCO3P41-201ENST00000414801 328 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AL365338.1-201ENST00000422282 858 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.37□□□□□ -2.35
RPS28P62857 MTCYBP1-201ENST00000454315 1119 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.37□□□□□ -2.35
RPS28P62857 snoU109.2-201ENST00000459316 135 ntBASIC0.37□□□□□ -2.35
RPS28P62857 RNU7-34P-201ENST00000459394 64 ntBASIC0.37□□□□□ -2.35
RPS28P62857 MTND1P3-201ENST00000484956 952 ntBASIC0.37□□□□□ -2.35
RPS28P62857 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.37□□□□□ -2.35
RPS28P62857 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.37□□□□□ -2.35
RPS28P62857 RNU5F-2P-201ENST00000516066 82 ntBASIC0.37□□□□□ -2.35
RPS28P62857 SNORA67.7-201ENST00000516664 135 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.37□□□□□ -2.35
RPS28P62857 AC023050.2-201ENST00000544968 387 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AC084364.2-201ENST00000546924 395 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.37□□□□□ -2.35
RPS28P62857 MIR4293-201ENST00000584305 78 ntBASIC0.37□□□□□ -2.35
RPS28P62857 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.37□□□□□ -2.35
RPS28P62857 AC022432.1-201ENST00000595739 310 ntBASIC0.37□□□□□ -2.35
RPS28P62857 FAM71BP1-201ENST00000604431 523 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AC007363.1-201ENST00000604736 620 ntBASIC0.37□□□□□ -2.35
RPS28P62857 BNIP3P10-201ENST00000605360 577 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AL138955.1-201ENST00000622881 1040 ntBASIC0.37□□□□□ -2.35
RPS28P62857 AL355480.1-201ENST00000629041 99 ntBASIC0.37□□□□□ -2.35
RPS28P62857 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.37□□□□□ -2.35
RPS28P62857 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
RPS28P62857 RNU6-862P-201ENST00000362804 105 ntBASIC0.36□□□□□ -2.35
RPS28P62857 RNU6-395P-201ENST00000365662 106 ntBASIC0.36□□□□□ -2.35
RPS28P62857 RNU6-72P-201ENST00000384285 79 ntBASIC0.36□□□□□ -2.35
RPS28P62857 FCF1P10-201ENST00000407590 479 ntBASIC0.36□□□□□ -2.35
RPS28P62857 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AL591704.1-201ENST00000432574 275 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AL591212.2-201ENST00000433923 257 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AC002429.1-201ENST00000437672 148 ntBASIC0.36□□□□□ -2.35
RPS28P62857 SNRPEP7-201ENST00000438350 220 ntBASIC0.36□□□□□ -2.35
RPS28P62857 MTCO3P43-201ENST00000440974 771 ntBASIC0.36□□□□□ -2.35
RPS28P62857 SNRPEP8-201ENST00000442866 260 ntBASIC0.36□□□□□ -2.35
RPS28P62857 RPL7P36-201ENST00000444633 681 ntBASIC0.36□□□□□ -2.35
RPS28P62857 UBL5P3-201ENST00000475112 231 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AC068587.2-201ENST00000478386 781 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.36□□□□□ -2.35
RPS28P62857 AC091163.3-201ENST00000518269 1144 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AL590705.4-201ENST00000532209 134 ntBASIC0.36□□□□□ -2.35
RPS28P62857 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
RPS28P62857 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC0.36□□□□□ -2.35
RPS28P62857 RPS3AP4-201ENST00000555161 764 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.36□□□□□ -2.35
RPS28P62857 AP005136.1-201ENST00000579765 429 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AC091135.1-201ENST00000585943 307 ntBASIC0.36□□□□□ -2.35
RPS28P62857 AC090186.1-201ENST00000605991 572 ntBASIC0.36□□□□□ -2.35
RPS28P62857 RNU1-96P-201ENST00000364163 162 ntBASIC0.35□□□□□ -2.35
RPS28P62857 MIR128-1-201ENST00000384921 82 ntBASIC0.35□□□□□ -2.35
RPS28P62857 MIR323B-201ENST00000385269 82 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AL079342.2-201ENST00000403367 482 ntBASIC0.35□□□□□ -2.35
RPS28P62857 RNA5SP508-201ENST00000411327 119 ntBASIC0.35□□□□□ -2.35
RPS28P62857 RNA5SP111-201ENST00000411386 101 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AC068533.2-201ENST00000411872 306 ntBASIC0.35□□□□□ -2.35
RPS28P62857 CYCSP33-201ENST00000414485 327 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.35□□□□□ -2.35
RPS28P62857 ELOCP9-201ENST00000418624 239 ntBASIC0.35□□□□□ -2.35
RPS28P62857 SNRPEP10-201ENST00000420249 274 ntBASIC0.35□□□□□ -2.35
RPS28P62857 ZFAND6P1-201ENST00000434138 605 ntBASIC0.35□□□□□ -2.35
RPS28P62857 MTND1P30-201ENST00000441241 901 ntBASIC0.35□□□□□ -2.35
RPS28P62857 PAXBP1P1-201ENST00000449315 447 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AL157398.1-201ENST00000452981 186 ntBASIC0.35□□□□□ -2.35
RPS28P62857 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.35□□□□□ -2.35
RPS28P62857 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.35□□□□□ -2.35
RPS28P62857 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.35□□□□□ -2.35
RPS28P62857 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.35□□□□□ -2.35
RPS28P62857 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.35□□□□□ -2.35
RPS28P62857 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC0.35□□□□□ -2.35
RPS28P62857 AC007179.3-201ENST00000604976 235 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AC026741.1-201ENST00000605892 482 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AC096577.2-201ENST00000611455 153 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AC091895.1-201ENST00000624494 256 ntBASIC0.35□□□□□ -2.35
RPS28P62857 AL133216.2-202ENST00000634512 349 ntBASIC0.35□□□□□ -2.35
RPS28P62857 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RPS28P62857 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.35□□□□□ -2.35
RPS28P62857 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.35□□□□□ -2.35
RPS28P62857 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.34□□□□□ -2.35
RPS28P62857 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.34□□□□□ -2.35
RPS28P62857 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
RPS28P62857 RNU6-438P-201ENST00000365561 103 ntBASIC0.34□□□□□ -2.36
RPS28P62857 Y_RNA.534-201ENST00000384599 112 ntBASIC0.34□□□□□ -2.36
RPS28P62857 MIR134-201ENST00000385258 73 ntBASIC0.34□□□□□ -2.36
RPS28P62857 MIR670-201ENST00000390142 98 ntBASIC0.34□□□□□ -2.36
RPS28P62857 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.34□□□□□ -2.36
RPS28P62857 UBE2Q2P12-201ENST00000414573 204 ntBASIC0.34□□□□□ -2.36
RPS28P62857 ARL5AP1-201ENST00000418991 388 ntBASIC0.34□□□□□ -2.36
RPS28P62857 MTCYBP5-201ENST00000423752 1135 ntBASIC0.34□□□□□ -2.36
RPS28P62857 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.34□□□□□ -2.36
RPS28P62857 CALM1P1-201ENST00000442082 433 ntBASIC0.34□□□□□ -2.36
RPS28P62857 EEF1E1P1-201ENST00000446998 430 ntBASIC0.34□□□□□ -2.36
RPS28P62857 AC006026.2-201ENST00000457376 180 ntBASIC0.34□□□□□ -2.36
RPS28P62857 AC093852.1-201ENST00000503587 266 ntBASIC0.34□□□□□ -2.36
RPS28P62857 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms