Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.41□□□□□ -2.02
LMO4P61968 AC092628.2-201ENST00000622492 339 ntBASIC2.41□□□□□ -2.02
LMO4P61968 MTND5P30-201ENST00000452896 1731 ntBASIC2.41□□□□□ -2.02
LMO4P61968 AC091564.4-201ENST00000533934 2194 ntBASIC2.41□□□□□ -2.02
LMO4P61968 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LMO4P61968 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.41□□□□□ -2.02
LMO4P61968 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
LMO4P61968 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
LMO4P61968 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
LMO4P61968 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LMO4P61968 SNORD3E-201ENST00000362899 217 ntBASIC2.4□□□□□ -2.03
LMO4P61968 Y_RNA.404-201ENST00000383978 102 ntBASIC2.4□□□□□ -2.03
LMO4P61968 RNU6-45P-201ENST00000384471 107 ntBASIC2.4□□□□□ -2.03
LMO4P61968 RNU6-95P-201ENST00000384697 107 ntBASIC2.4□□□□□ -2.03
LMO4P61968 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.4□□□□□ -2.03
LMO4P61968 Y_RNA.594-201ENST00000410373 140 ntBASIC2.4□□□□□ -2.03
LMO4P61968 Y_RNA.605-201ENST00000410577 105 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC080125.1-201ENST00000414888 684 ntBASIC2.4□□□□□ -2.03
LMO4P61968 MCFD2P1-201ENST00000417812 300 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC099548.1-201ENST00000421443 426 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC018865.2-201ENST00000423631 129 ntBASIC2.4□□□□□ -2.03
LMO4P61968 TRIAP1P1-201ENST00000427062 225 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AL160004.2-201ENST00000432935 350 ntBASIC2.4□□□□□ -2.03
LMO4P61968 IPO7P1-201ENST00000442031 636 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.4□□□□□ -2.03
LMO4P61968 RPS29P12-201ENST00000460178 152 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AL160314.1-201ENST00000490836 438 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC097473.1-201ENST00000508142 408 ntBASIC2.4□□□□□ -2.03
LMO4P61968 RNU6-927P-201ENST00000516199 100 ntBASIC2.4□□□□□ -2.03
LMO4P61968 Y_RNA.670-201ENST00000516255 105 ntBASIC2.4□□□□□ -2.03
LMO4P61968 Y_RNA.708-201ENST00000516950 96 ntBASIC2.4□□□□□ -2.03
LMO4P61968 CYCSP27-201ENST00000527643 293 ntBASIC2.4□□□□□ -2.03
LMO4P61968 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.4□□□□□ -2.03
LMO4P61968 MIR4672-201ENST00000583126 81 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC024153.1-201ENST00000603103 365 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC012119.1-201ENST00000603184 222 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC018462.2-201ENST00000605375 395 ntBASIC2.4□□□□□ -2.03
LMO4P61968 MIR15A-201ENST00000607334 83 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.4□□□□□ -2.03
LMO4P61968 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.4□□□□□ -2.03
LMO4P61968 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.4□□□□□ -2.03
LMO4P61968 7SK.10-201ENST00000621414 298 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AC092608.2-201ENST00000624427 218 ntBASIC2.4□□□□□ -2.03
LMO4P61968 AL078596.1-201ENST00000624856 447 ntBASIC2.4□□□□□ -2.03
LMO4P61968 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
LMO4P61968 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LMO4P61968 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LMO4P61968 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LMO4P61968 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LMO4P61968 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.39□□□□□ -2.03
LMO4P61968 AC138393.1-203ENST00000327086 343 ntBASIC2.39□□□□□ -2.03
LMO4P61968 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
LMO4P61968 U3.6-201ENST00000363622 211 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-270P-201ENST00000364131 105 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-266P-201ENST00000364225 107 ntBASIC2.39□□□□□ -2.03
LMO4P61968 SNORA75B-201ENST00000384053 137 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-217P-201ENST00000384164 104 ntBASIC2.39□□□□□ -2.03
LMO4P61968 Y_RNA.463-201ENST00000384271 102 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-306P-201ENST00000384617 107 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-1106P-201ENST00000390845 107 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-1050P-201ENST00000410388 107 ntBASIC2.39□□□□□ -2.03
LMO4P61968 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LMO4P61968 AC092047.1-201ENST00000424997 240 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC087499.2-201ENST00000432861 149 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.39□□□□□ -2.03
LMO4P61968 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.39□□□□□ -2.03
LMO4P61968 AL359672.1-201ENST00000442302 409 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU6-953P-201ENST00000459154 107 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AP002884.2-201ENST00000471647 395 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RN7SL633P-201ENST00000488974 297 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC026801.1-201ENST00000497178 464 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.39□□□□□ -2.03
LMO4P61968 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.39□□□□□ -2.03
LMO4P61968 AC104136.1-201ENST00000512969 394 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNA5SP290-201ENST00000517133 127 ntBASIC2.39□□□□□ -2.03
LMO4P61968 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC009902.1-201ENST00000519351 183 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC025423.5-201ENST00000550230 219 ntBASIC2.39□□□□□ -2.03
LMO4P61968 MIR3162-201ENST00000581818 82 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC073539.2-201ENST00000597113 165 ntBASIC2.39□□□□□ -2.03
LMO4P61968 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.39□□□□□ -2.03
LMO4P61968 AC002044.1-201ENST00000606707 158 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC083806.3-201ENST00000614016 455 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC007485.1-201ENST00000616755 206 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AL132822.1-201ENST00000617063 513 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.39□□□□□ -2.03
LMO4P61968 AL079305.1-201ENST00000623159 3008 ntBASIC2.39□□□□□ -2.03
LMO4P61968 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LMO4P61968 SRP72P2-201ENST00000344851 1979 ntBASIC2.39□□□□□ -2.03
LMO4P61968 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.39□□□□□ -2.03
LMO4P61968 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
LMO4P61968 AC010680.1-201ENST00000590024 3590 ntBASIC2.39□□□□□ -2.03
LMO4P61968 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LMO4P61968 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.38□□□□□ -2.03
LMO4P61968 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.38□□□□□ -2.03
LMO4P61968 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.38□□□□□ -2.03
LMO4P61968 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
LMO4P61968 AC117470.1-201ENST00000381974 330 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms