Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.06□□□□□ -2.24
AP1S1P61966 AC109329.1-201ENST00000518744 317 ntBASIC1.06□□□□□ -2.24
AP1S1P61966 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.06□□□□□ -2.24
AP1S1P61966 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.06□□□□□ -2.24
AP1S1P61966 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.06□□□□□ -2.24
AP1S1P61966 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.06□□□□□ -2.24
AP1S1P61966 AL022345.1-201ENST00000607292 135 ntBASIC1.06□□□□□ -2.24
AP1S1P61966 AL355802.3-201ENST00000607571 545 ntBASIC1.06□□□□□ -2.24
AP1S1P61966 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.06□□□□□ -2.24
AP1S1P61966 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.06□□□□□ -2.24
AP1S1P61966 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
AP1S1P61966 AC233981.2-201ENST00000611524 1614 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 snoU2_19.1-201ENST00000362361 80 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 RNU6-723P-201ENST00000383973 107 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 RNU6-1257P-201ENST00000384625 110 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 RPL37P10-201ENST00000412884 288 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AL365338.1-201ENST00000422282 858 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.05□□□□□ -2.24
AP1S1P61966 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.05□□□□□ -2.24
AP1S1P61966 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.05□□□□□ -2.24
AP1S1P61966 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.05□□□□□ -2.24
AP1S1P61966 CALM1P1-201ENST00000442082 433 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.05□□□□□ -2.24
AP1S1P61966 GDI2P2-201ENST00000445131 608 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.05□□□□□ -2.24
AP1S1P61966 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
AP1S1P61966 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.05□□□□□ -2.24
AP1S1P61966 RPL30P6-201ENST00000475925 342 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AC104982.1-201ENST00000478775 574 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AC093259.1-201ENST00000509755 300 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.05□□□□□ -2.24
AP1S1P61966 AC010587.2-201ENST00000511727 448 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 Y_RNA.689-201ENST00000516589 107 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.05□□□□□ -2.24
AP1S1P61966 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 AC012065.4-201ENST00000602445 679 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.05□□□□□ -2.24
AP1S1P61966 AC063943.3-201ENST00000615562 356 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
AP1S1P61966 ZNF680P1-201ENST00000436625 1469 ntBASIC1.05□□□□□ -2.24
AP1S1P61966 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
AP1S1P61966 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.04□□□□□ -2.24
AP1S1P61966 HAUS6P2-201ENST00000433254 2404 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 CBX3P1-201ENST00000325243 554 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 RNU6-655P-201ENST00000362858 107 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 RNU6-511P-201ENST00000363496 107 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 SNORD114-6-201ENST00000364393 72 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 SNORD14B-201ENST00000364533 90 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 RNU6-946P-201ENST00000383878 107 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 Y_RNA.465-201ENST00000384293 102 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
AP1S1P61966 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S1P61966 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S1P61966 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.04□□□□□ -2.24
AP1S1P61966 SNORA31.17-201ENST00000516953 127 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S1P61966 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.04□□□□□ -2.24
AP1S1P61966 CR383656.8-201ENST00000549046 145 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 AC136618.2-201ENST00000575091 400 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 KC877982.1-201ENST00000602313 470 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 WISP1-OT1-201ENST00000602893 642 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 AC091965.4-201ENST00000607691 587 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 AC093648.1-201ENST00000623546 606 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.04□□□□□ -2.24
AP1S1P61966 AC106858.1-201ENST00000637497 429 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 MIR3529-201ENST00000637713 78 ntBASIC1.04□□□□□ -2.24
AP1S1P61966 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.03□□□□□ -2.24
AP1S1P61966 Y_RNA.4-201ENST00000362333 112 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 RNU5E-6P-201ENST00000365574 115 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 RNU6-72P-201ENST00000384285 79 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 SNORA48.1-201ENST00000390879 135 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 CBX3P9-201ENST00000402326 552 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 RNU4-22P-201ENST00000411058 166 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.03□□□□□ -2.24
AP1S1P61966 SRIP3-201ENST00000413200 219 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC009518.2-201ENST00000418056 731 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC092648.1-201ENST00000425870 423 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 USP9YP18-201ENST00000425912 695 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S1P61966 HMGB1P30-201ENST00000492455 606 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC009646.1-201ENST00000510455 318 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC123904.2-201ENST00000548059 300 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S1P61966 MTND4LP25-201ENST00000570218 163 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 MIR3146-201ENST00000580367 79 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC112220.3-201ENST00000605502 502 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC080013.3-201ENST00000606839 578 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC072039.2-201ENST00000608883 439 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC022513.1-201ENST00000624512 117 ntBASIC1.03□□□□□ -2.24
AP1S1P61966 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.03□□□□□ -2.24
AP1S1P61966 AC092104.1-201ENST00000497346 1441 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms