Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RNU6-1137P-201ENST00000517073 99 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SEC61A1P61619 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.79□□□□□ -1.96
SEC61A1P61619 AC022634.1-201ENST00000520765 532 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.79□□□□□ -1.96
SEC61A1P61619 HIGD1AP1-201ENST00000550979 275 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AL391261.3-201ENST00000557194 520 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.79□□□□□ -1.96
SEC61A1P61619 MIR5195-201ENST00000583555 115 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 MIR3976-201ENST00000606807 139 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AL591516.1-201ENST00000611326 274 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 MIR7112-201ENST00000616126 65 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AC099506.2-201ENST00000623074 221 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SEC61A1P61619 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.79□□□□□ -1.96
SEC61A1P61619 U2.21-201ENST00000637295 81 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SEC61A1P61619 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SEC61A1P61619 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.78□□□□□ -1.96
SEC61A1P61619 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.78□□□□□ -1.96
SEC61A1P61619 Y_RNA.112-201ENST00000363250 102 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU6-1317P-201ENST00000364582 104 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 SNORA75.6-201ENST00000391318 127 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU6-1077P-201ENST00000410506 102 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC243428.1-201ENST00000421099 264 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 USMG5P1-201ENST00000425964 177 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AL035666.1-201ENST00000446195 348 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 Z75741.1-201ENST00000446793 314 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.78□□□□□ -1.96
SEC61A1P61619 AC091179.1-201ENST00000461606 579 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.78□□□□□ -1.96
SEC61A1P61619 RPL23AP45-201ENST00000476406 468 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 FO393415.2-201ENST00000480085 343 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.78□□□□□ -1.96
SEC61A1P61619 AC022493.2-201ENST00000506122 481 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU6-470P-201ENST00000515954 104 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU1-103P-201ENST00000516502 125 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU6-1046P-201ENST00000516538 107 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU6-699P-201ENST00000517081 110 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SEC61A1P61619 RNU6-988P-201ENST00000519081 107 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.78□□□□□ -1.96
SEC61A1P61619 AC007536.1-201ENST00000533382 349 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC103996.1-201ENST00000555468 102 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.78□□□□□ -1.96
SEC61A1P61619 HMGN2P15-201ENST00000585707 270 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AL355802.3-201ENST00000607571 545 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 uc_338.1-201ENST00000612113 180 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC006111.3-201ENST00000622137 383 ntBASIC2.78□□□□□ -1.96
SEC61A1P61619 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.78□□□□□ -1.96
SEC61A1P61619 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SEC61A1P61619 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
SEC61A1P61619 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SEC61A1P61619 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 AL136164.4-201ENST00000625013 2135 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 RNU6-639P-201ENST00000384074 107 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 Y_RNA.459-201ENST00000384251 102 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 RNU6-658P-201ENST00000384606 106 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AL357075.1-201ENST00000404107 726 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 SNORD56-201ENST00000413522 71 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AL096701.2-201ENST00000416920 238 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 BX276092.3-201ENST00000424182 230 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 AL627311.1-201ENST00000431514 115 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AL353705.1-201ENST00000433468 480 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 SETP5-201ENST00000437270 562 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.77□□□□□ -1.97
SEC61A1P61619 AL078601.1-201ENST00000444542 271 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.77□□□□□ -1.97
SEC61A1P61619 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 HMGN2P13-201ENST00000476476 274 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 RPS27AP10-201ENST00000496103 208 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 RNU6-976P-201ENST00000516086 111 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 RN7SKP57-201ENST00000517248 293 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.77□□□□□ -1.97
SEC61A1P61619 AC008121.1-201ENST00000603244 268 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AC006157.1-201ENST00000611750 366 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 Z69720.2-201ENST00000624755 279 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 AC118273.1-201ENST00000525324 3006 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 Z83843.1-201ENST00000604070 3685 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SEC61A1P61619 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SEC61A1P61619 AL359693.1-201ENST00000614959 2407 ntBASIC2.77□□□□□ -1.97
SEC61A1P61619 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.76□□□□□ -1.97
SEC61A1P61619 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SEC61A1P61619 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SEC61A1P61619 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SEC61A1P61619 RNU6-428P-201ENST00000362942 107 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 RNU6-778P-201ENST00000363269 103 ntBASIC2.76□□□□□ -1.97
SEC61A1P61619 Z98749.2-208ENST00000381646 500 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms