Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.1□□□□□ -2.23
CLDN12P56749 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.1□□□□□ -2.23
CLDN12P56749 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.1□□□□□ -2.23
CLDN12P56749 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.1□□□□□ -2.23
CLDN12P56749 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.1□□□□□ -2.23
CLDN12P56749 AL136363.2-201ENST00000604173 851 ntBASIC1.1□□□□□ -2.23
CLDN12P56749 U6.42-201ENST00000618440 107 ntBASIC1.1□□□□□ -2.23
CLDN12P56749 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.1□□□□□ -2.23
CLDN12P56749 MIR302D-201ENST00000362275 68 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 RNU6-112P-201ENST00000363599 104 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 RNU6-743P-201ENST00000364151 106 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 SNORD14B-201ENST00000364533 90 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 RNU4-22P-201ENST00000411058 166 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 AC069282.1-201ENST00000411911 526 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 JTBP1-201ENST00000441314 247 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN12P56749 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN12P56749 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN12P56749 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 RNU6-991P-201ENST00000516168 107 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN12P56749 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDN12P56749 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDN12P56749 AL158211.2-201ENST00000607282 395 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.09□□□□□ -2.23
CLDN12P56749 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.09□□□□□ -2.23
CLDN12P56749 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDN12P56749 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CLDN12P56749 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
CLDN12P56749 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLDN12P56749 RNU1-17P-201ENST00000363022 152 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 RNU6-360P-201ENST00000390944 104 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN12P56749 AL589872.1-201ENST00000426602 288 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 TOMM20P4-201ENST00000427861 435 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN12P56749 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN12P56749 AL008629.1-201ENST00000438615 184 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AL117351.1-201ENST00000438864 766 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 USP9YP17-201ENST00000444617 696 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN12P56749 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 RPL26P26-201ENST00000480251 434 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN12P56749 MTND2P33-201ENST00000506452 1031 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN12P56749 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN12P56749 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN12P56749 RNU6-276P-201ENST00000516114 96 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 SNORA43.2-201ENST00000516652 128 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AC011979.2-201ENST00000527568 352 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.08□□□□□ -2.24
CLDN12P56749 DNAJC19P9-201ENST00000555084 351 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AC012414.6-201ENST00000568241 401 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AC009977.1-201ENST00000586015 570 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.08□□□□□ -2.24
CLDN12P56749 AC078795.2-201ENST00000602835 1252 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 AL359547.2-201ENST00000615810 418 ntBASIC1.08□□□□□ -2.24
CLDN12P56749 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLDN12P56749 MTND5P9-201ENST00000503854 1755 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLDN12P56749 snoU2_19.1-201ENST00000362361 80 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 Y_RNA.332-201ENST00000365271 113 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 MIR10A-201ENST00000385043 110 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN12P56749 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN12P56749 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.07□□□□□ -2.24
CLDN12P56749 MTND2P4-201ENST00000445034 1004 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDN12P56749 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLDN12P56749 DUXAP8-207ENST00000456786 622 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 snoU109.2-201ENST00000459316 135 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AC108210.2-201ENST00000503681 201 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 Y_RNA.689-201ENST00000516589 107 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AP003122.4-201ENST00000530980 758 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AC023050.2-201ENST00000544968 387 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDN12P56749 AC091135.1-201ENST00000585943 307 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AC025754.2-201ENST00000606491 432 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 AL355816.2-201ENST00000610049 647 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 MIR6715A-201ENST00000615929 79 ntBASIC1.07□□□□□ -2.24
CLDN12P56749 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLDN12P56749 SNORA4.1-201ENST00000364263 144 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 SNORD1A-201ENST00000364968 72 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 RNU6-296P-201ENST00000384608 107 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 RNA5SP213-201ENST00000391031 106 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 AC092809.3-201ENST00000415453 231 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN12P56749 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN12P56749 AC027119.1-201ENST00000440877 241 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 CR769776.1-201ENST00000441254 787 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN12P56749 AC112206.3-201ENST00000514578 389 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 RNU6-201P-201ENST00000517100 61 ntBASIC1.06□□□□□ -2.24
CLDN12P56749 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN12P56749 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms