Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.500-201ENST00000384466 111 ntBASIC2.53□□□□□ -2
CDH11P55287 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
CDH11P55287 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDH11P55287 MIR450B-201ENST00000401182 78 ntBASIC2.53□□□□□ -2
CDH11P55287 FTH1P15-201ENST00000406984 280 ntBASIC2.53□□□□□ -2
CDH11P55287 SNORA11.2-201ENST00000408318 127 ntBASIC2.53□□□□□ -2
CDH11P55287 VN1R36P-201ENST00000414936 291 ntBASIC2.53□□□□□ -2
CDH11P55287 RPL7P37-201ENST00000425095 738 ntBASIC2.53□□□□□ -2
CDH11P55287 AL353572.1-201ENST00000442490 417 ntBASIC2.53□□□□□ -2
CDH11P55287 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
CDH11P55287 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
CDH11P55287 RPL23AP45-201ENST00000476406 468 ntBASIC2.53□□□□□ -2
CDH11P55287 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
CDH11P55287 TRBVA-201ENST00000498804 316 ntBASIC2.53□□□□□ -2
CDH11P55287 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.53□□□□□ -2
CDH11P55287 AC025465.4-201ENST00000513422 638 ntBASIC2.53□□□□□ -2
CDH11P55287 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.53□□□□□ -2
CDH11P55287 AC046134.1-201ENST00000514454 666 ntBASIC2.53□□□□□ -2
CDH11P55287 RNU6-1088P-201ENST00000516850 104 ntBASIC2.53□□□□□ -2
CDH11P55287 AC069113.1-201ENST00000517763 267 ntBASIC2.53□□□□□ -2
CDH11P55287 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.53□□□□□ -2
CDH11P55287 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.53□□□□□ -2
CDH11P55287 AC087241.2-201ENST00000535801 324 ntBASIC2.53□□□□□ -2
CDH11P55287 SCOCP1-201ENST00000554676 349 ntBASIC2.53□□□□□ -2
CDH11P55287 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.53□□□□□ -2
CDH11P55287 AC138761.3-201ENST00000579993 334 ntBASIC2.53□□□□□ -2
CDH11P55287 MIR4742-201ENST00000581069 85 ntBASIC2.53□□□□□ -2
CDH11P55287 AC024153.1-201ENST00000603103 365 ntBASIC2.53□□□□□ -2
CDH11P55287 AL670379.10-201ENST00000604330 253 ntBASIC2.53□□□□□ -2
CDH11P55287 AL670379.9-201ENST00000605428 253 ntBASIC2.53□□□□□ -2
CDH11P55287 RNU6-85P-201ENST00000605989 107 ntBASIC2.53□□□□□ -2
CDH11P55287 AL138726.1-201ENST00000614873 333 ntBASIC2.53□□□□□ -2
CDH11P55287 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.53□□□□□ -2
CDH11P55287 U4.7-201ENST00000638126 106 ntBASIC2.53□□□□□ -2
CDH11P55287 ADAM3A-203ENST00000461344 2157 ntBASIC2.53□□□□□ -2
CDH11P55287 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH11P55287 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
CDH11P55287 CBX3P1-201ENST00000325243 554 ntBASIC2.52□□□□□ -2.01
CDH11P55287 RNU6-1252P-201ENST00000363054 104 ntBASIC2.52□□□□□ -2.01
CDH11P55287 SNORA32.2-201ENST00000384049 122 ntBASIC2.52□□□□□ -2.01
CDH11P55287 RNU6-510P-201ENST00000391239 108 ntBASIC2.52□□□□□ -2.01
CDH11P55287 MTND3P8-201ENST00000412909 339 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AC096649.2-201ENST00000416186 393 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AL117339.3-201ENST00000418733 162 ntBASIC2.52□□□□□ -2.01
CDH11P55287 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH11P55287 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH11P55287 AL161651.1-201ENST00000440882 223 ntBASIC2.52□□□□□ -2.01
CDH11P55287 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH11P55287 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
CDH11P55287 RPL32P28-201ENST00000443577 397 ntBASIC2.52□□□□□ -2.01
CDH11P55287 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.52□□□□□ -2.01
CDH11P55287 NIPA2P5-201ENST00000452282 464 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AC107626.1-201ENST00000471084 183 ntBASIC2.52□□□□□ -2.01
CDH11P55287 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH11P55287 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
CDH11P55287 SNORA43.2-201ENST00000516652 128 ntBASIC2.52□□□□□ -2.01
CDH11P55287 RNU6-256P-201ENST00000516747 97 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.52□□□□□ -2.01
CDH11P55287 AC087854.1-201ENST00000519706 414 ntBASIC2.52□□□□□ -2.01
CDH11P55287 RNU6-323P-201ENST00000521915 107 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AP004607.1-201ENST00000524456 203 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AP000763.2-201ENST00000540641 163 ntBASIC2.52□□□□□ -2.01
CDH11P55287 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
CDH11P55287 CR383656.8-201ENST00000549046 145 ntBASIC2.52□□□□□ -2.01
CDH11P55287 GTF3AP2-201ENST00000557014 266 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.52□□□□□ -2.01
CDH11P55287 AC100830.2-201ENST00000581636 240 ntBASIC2.52□□□□□ -2.01
CDH11P55287 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH11P55287 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH11P55287 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AC023043.2-201ENST00000589678 1026 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AL391813.1-201ENST00000603098 260 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AL357078.3-201ENST00000607528 618 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AL355073.2-201ENST00000612106 557 ntBASIC2.52□□□□□ -2.01
CDH11P55287 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
CDH11P55287 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH11P55287 AL133216.2-202ENST00000634512 349 ntBASIC2.52□□□□□ -2.01
CDH11P55287 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH11P55287 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
CDH11P55287 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH11P55287 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH11P55287 RNU6-78P-201ENST00000362897 107 ntBASIC2.51□□□□□ -2.01
CDH11P55287 SNORD73A-201ENST00000386062 65 ntBASIC2.51□□□□□ -2.01
CDH11P55287 MIR1289-1-201ENST00000408836 144 ntBASIC2.51□□□□□ -2.01
CDH11P55287 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.51□□□□□ -2.01
CDH11P55287 AC105272.1-201ENST00000438604 198 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AC098614.3-201ENST00000438957 440 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AL359672.1-201ENST00000442302 409 ntBASIC2.51□□□□□ -2.01
CDH11P55287 RPL7P12-201ENST00000446719 750 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH11P55287 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH11P55287 MRPL42P6-201ENST00000486397 371 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AIG1P1-201ENST00000503376 148 ntBASIC2.51□□□□□ -2.01
CDH11P55287 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH11P55287 AC092436.3-201ENST00000511788 257 ntBASIC2.51□□□□□ -2.01
CDH11P55287 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
CDH11P55287 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
CDH11P55287 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 1853.8 ms