Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.92□□□□□ -1.94
NR1H2P55055 HMGN1P12-201ENST00000499125 195 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 AC008628.2-201ENST00000502605 298 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.92□□□□□ -1.94
NR1H2P55055 RN7SKP256-201ENST00000517201 314 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NR1H2P55055 AC243972.3-201ENST00000539655 198 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.92□□□□□ -1.94
NR1H2P55055 AC105137.2-201ENST00000569073 466 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 MIR3199-1-201ENST00000582434 88 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 RPS15AP11-201ENST00000594193 385 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 APOOP1-201ENST00000604695 592 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 RNU6-85P-201ENST00000605989 107 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NR1H2P55055 AC092794.2-201ENST00000620933 563 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.92□□□□□ -1.94
NR1H2P55055 Z75746.1-201ENST00000440243 2080 ntBASIC2.92□□□□□ -1.94
NR1H2P55055 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-37P-201ENST00000362692 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-11P-201ENST00000364234 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-7-201ENST00000364784 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-8-201ENST00000365467 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-25P-201ENST00000383873 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-1-201ENST00000383898 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-48P-201ENST00000384161 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-36P-201ENST00000384172 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-4P-201ENST00000384205 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-5P-201ENST00000384238 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-3P-201ENST00000384314 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-16P-201ENST00000384385 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-15P-201ENST00000384534 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-2-201ENST00000384627 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-29P-201ENST00000384637 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-9-201ENST00000384776 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-33P-201ENST00000384793 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-1106P-201ENST00000390845 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-1245P-201ENST00000411130 106 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.91□□□□□ -1.94
NR1H2P55055 AC074117.2-201ENST00000417130 397 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AC138623.1-201ENST00000418060 216 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 IFNA20P-201ENST00000436840 528 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 MTND5P20-201ENST00000448677 143 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 UBE2DNL-203ENST00000474922 222 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.91□□□□□ -1.94
NR1H2P55055 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-377P-201ENST00000515965 102 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNA5SP341-201ENST00000516261 117 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.91□□□□□ -1.94
NR1H2P55055 HSPE1P20-201ENST00000538133 289 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AC005476.1-201ENST00000554427 397 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AC027176.1-201ENST00000560204 514 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 MIR5004-201ENST00000579078 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AC123912.5-201ENST00000605470 343 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 RNU6-6P-201ENST00000606623 107 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 AL157817.1-201ENST00000614264 790 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.91□□□□□ -1.94
NR1H2P55055 U4.7-201ENST00000638126 106 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NR1H2P55055 RBBP8P1-201ENST00000449447 1844 ntBASIC2.91□□□□□ -1.94
NR1H2P55055 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NR1H2P55055 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NR1H2P55055 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NR1H2P55055 RNU6-845P-201ENST00000362578 103 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RNU6-1010P-201ENST00000362757 107 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RNU6-78P-201ENST00000362897 107 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 Y_RNA.500-201ENST00000384466 111 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 UBA52P6-201ENST00000399822 382 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 Y_RNA.604-201ENST00000410574 102 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.9□□□□□ -1.95
NR1H2P55055 COTL1P1-201ENST00000422309 375 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AC236972.1-201ENST00000433225 199 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.9□□□□□ -1.95
NR1H2P55055 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.9□□□□□ -1.95
NR1H2P55055 AC109925.1-201ENST00000478069 331 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RPL7P43-201ENST00000478876 753 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RPL23AP49-201ENST00000492925 468 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.9□□□□□ -1.95
NR1H2P55055 MTCYBP40-201ENST00000509390 1135 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AC087854.1-201ENST00000519706 414 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AC087241.2-201ENST00000535801 324 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 EIF4BP1-201ENST00000554881 351 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AC026464.5-201ENST00000562497 722 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 MIR3942-201ENST00000585264 109 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.9□□□□□ -1.95
NR1H2P55055 FAM157A-202ENST00000615155 405 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 AC022306.2-201ENST00000617563 647 ntBASIC2.9□□□□□ -1.95
NR1H2P55055 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
NR1H2P55055 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NR1H2P55055 RNU6-527P-201ENST00000363425 104 ntBASIC2.89□□□□□ -1.95
NR1H2P55055 RNU6-1328P-201ENST00000410938 106 ntBASIC2.89□□□□□ -1.95
NR1H2P55055 MTND3P8-201ENST00000412909 339 ntBASIC2.89□□□□□ -1.95
NR1H2P55055 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.89□□□□□ -1.95
NR1H2P55055 MTCO3P46-201ENST00000425787 232 ntBASIC2.89□□□□□ -1.95
NR1H2P55055 Z75741.1-201ENST00000446793 314 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms