Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 Y_RNA.33-201ENST00000362591 102 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 SNORD3E-201ENST00000362899 217 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 RNA5SP393-201ENST00000363423 117 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS2P54868 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGCS2P54868 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 TIMM9P3-201ENST00000428659 274 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 AC003989.2-201ENST00000440224 169 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 USP9YP8-201ENST00000441913 500 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS2P54868 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 RNU7-63P-201ENST00000459054 62 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AC083798.1-201ENST00000472671 131 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 EIF4EP3-201ENST00000498782 656 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 RNU6-835P-201ENST00000516974 104 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 RNU6-1183P-201ENST00000517054 60 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AP003033.1-201ENST00000527244 415 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGCS2P54868 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCS2P54868 AC025165.5-201ENST00000602802 578 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AC008945.2-201ENST00000606056 604 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS2P54868 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCS2P54868 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
HMGCS2P54868 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 AL354685.2-201ENST00000448218 1447 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-552P-201ENST00000362869 119 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-1287P-201ENST00000362914 107 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-1085P-201ENST00000363576 107 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-996P-201ENST00000365438 107 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-166P-201ENST00000384371 107 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-1060P-201ENST00000384664 107 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGCS2P54868 RNA5SP111-201ENST00000411386 101 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 NDUFS5P4-201ENST00000412983 318 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 RPL26P27-201ENST00000414397 437 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AL353729.1-201ENST00000425044 720 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AL669831.1-202ENST00000428504 417 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGCS2P54868 GTF2IP13-201ENST00000438487 386 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AL163973.1-201ENST00000484753 577 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AC112206.3-201ENST00000514578 389 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 RNU6-314P-201ENST00000516574 104 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 SNORA31.15-201ENST00000516771 132 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 Y_RNA.704-201ENST00000516851 102 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 SNORA31.19-201ENST00000517079 126 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 HMGB1P33-201ENST00000563485 527 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGCS2P54868 MIR5194-201ENST00000582634 120 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AC073539.2-201ENST00000597113 165 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS2P54868 AC093788.1-201ENST00000609356 927 ntBASIC2.28□□□□□ -2.04
HMGCS2P54868 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGCS2P54868 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGCS2P54868 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGCS2P54868 SNORA38-201ENST00000363946 132 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU6-1322P-201ENST00000364309 107 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 Y_RNA.255-201ENST00000364581 97 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU6-395P-201ENST00000365662 106 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU6-483P-201ENST00000384088 108 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 MIR181A1-201ENST00000385026 110 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU2-29P-201ENST00000410423 189 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU4-46P-201ENST00000410818 138 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AC096649.2-201ENST00000416186 393 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGCS2P54868 MTND1P4-201ENST00000435196 415 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGCS2P54868 AC098831.1-201ENST00000440661 216 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGCS2P54868 OSTCP8-201ENST00000445117 448 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RN7SKP210-201ENST00000459176 261 ntBASIC2.27□□□□□ -2.05
HMGCS2P54868 RNU7-180P-201ENST00000459240 63 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms