Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNU2-38P-201ENST00000410856 79 ntBASIC3.99□□□□□ -1.77
PMS1P54277 RNU6-130P-201ENST00000411112 103 ntBASIC3.99□□□□□ -1.77
PMS1P54277 RAB9AP3-201ENST00000412737 573 ntBASIC3.99□□□□□ -1.77
PMS1P54277 EIF1AXP1-201ENST00000419267 435 ntBASIC3.99□□□□□ -1.77
PMS1P54277 Z82188.1-201ENST00000436709 154 ntBASIC3.99□□□□□ -1.77
PMS1P54277 RPL23AP22-201ENST00000437556 453 ntBASIC3.99□□□□□ -1.77
PMS1P54277 RAB9AP1-201ENST00000449393 573 ntBASIC3.99□□□□□ -1.77
PMS1P54277 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.99□□□□□ -1.77
PMS1P54277 RPL26P9-201ENST00000457466 433 ntBASIC3.99□□□□□ -1.77
PMS1P54277 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.99□□□□□ -1.77
PMS1P54277 MIR2355-201ENST00000517199 87 ntBASIC3.99□□□□□ -1.77
PMS1P54277 MRPS36P4-201ENST00000534436 298 ntBASIC3.99□□□□□ -1.77
PMS1P54277 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.99□□□□□ -1.77
PMS1P54277 AC011602.1-201ENST00000546484 331 ntBASIC3.99□□□□□ -1.77
PMS1P54277 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.99□□□□□ -1.77
PMS1P54277 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.99□□□□□ -1.77
PMS1P54277 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
PMS1P54277 AL355877.2-201ENST00000603670 358 ntBASIC3.99□□□□□ -1.77
PMS1P54277 AC078938.1-201ENST00000620993 318 ntBASIC3.99□□□□□ -1.77
PMS1P54277 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PMS1P54277 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PMS1P54277 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PMS1P54277 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.98□□□□□ -1.77
PMS1P54277 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PMS1P54277 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.98□□□□□ -1.77
PMS1P54277 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
PMS1P54277 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.98□□□□□ -1.77
PMS1P54277 CUL1P1-201ENST00000509510 2425 ntBASIC3.98□□□□□ -1.77
PMS1P54277 Y_RNA.14-201ENST00000362415 103 ntBASIC3.98□□□□□ -1.77
PMS1P54277 SNORD56.1-201ENST00000362913 68 ntBASIC3.98□□□□□ -1.77
PMS1P54277 Y_RNA.458-201ENST00000384240 102 ntBASIC3.98□□□□□ -1.77
PMS1P54277 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.98□□□□□ -1.77
PMS1P54277 AC091286.1-201ENST00000431233 461 ntBASIC3.98□□□□□ -1.77
PMS1P54277 AC091390.1-201ENST00000433904 331 ntBASIC3.98□□□□□ -1.77
PMS1P54277 AC009296.1-201ENST00000443146 155 ntBASIC3.98□□□□□ -1.77
PMS1P54277 RNA5SP310-201ENST00000459084 116 ntBASIC3.98□□□□□ -1.77
PMS1P54277 TRBVB-201ENST00000477100 408 ntBASIC3.98□□□□□ -1.77
PMS1P54277 RPS27AP10-201ENST00000496103 208 ntBASIC3.98□□□□□ -1.77
PMS1P54277 AC067942.3-201ENST00000512025 362 ntBASIC3.98□□□□□ -1.77
PMS1P54277 NACAP3-201ENST00000552100 481 ntBASIC3.98□□□□□ -1.77
PMS1P54277 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PMS1P54277 MIR5685-201ENST00000579080 79 ntBASIC3.98□□□□□ -1.77
PMS1P54277 AC096772.1-201ENST00000609146 564 ntBASIC3.98□□□□□ -1.77
PMS1P54277 SCARNA4-201ENST00000629045 128 ntBASIC3.98□□□□□ -1.77
PMS1P54277 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PMS1P54277 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.98□□□□□ -1.77
PMS1P54277 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PMS1P54277 HSPA8P1-201ENST00000425843 1833 ntBASIC3.98□□□□□ -1.77
PMS1P54277 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PMS1P54277 MIR423-201ENST00000362201 94 ntBASIC3.97□□□□□ -1.77
PMS1P54277 RNA5SP51-201ENST00000364750 119 ntBASIC3.97□□□□□ -1.77
PMS1P54277 RNU6-1280P-201ENST00000365211 107 ntBASIC3.97□□□□□ -1.77
PMS1P54277 RNU6-1286P-201ENST00000383871 107 ntBASIC3.97□□□□□ -1.77
PMS1P54277 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 AC009310.1-201ENST00000414414 451 ntBASIC3.97□□□□□ -1.77
PMS1P54277 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.97□□□□□ -1.77
PMS1P54277 DBIP2-201ENST00000419076 262 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.97□□□□□ -1.77
PMS1P54277 SDAD1P3-201ENST00000427380 333 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.97□□□□□ -1.77
PMS1P54277 ARL5AP4-201ENST00000430731 512 ntBASIC3.97□□□□□ -1.77
PMS1P54277 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.97□□□□□ -1.77
PMS1P54277 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.97□□□□□ -1.77
PMS1P54277 RPL39P38-201ENST00000467018 153 ntBASIC3.97□□□□□ -1.77
PMS1P54277 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.97□□□□□ -1.77
PMS1P54277 RPL23AP75-201ENST00000491601 451 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AC010469.2-201ENST00000496412 480 ntBASIC3.97□□□□□ -1.77
PMS1P54277 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.97□□□□□ -1.77
PMS1P54277 RNU1-61P-201ENST00000516107 151 ntBASIC3.97□□□□□ -1.77
PMS1P54277 Y_RNA.713-201ENST00000517013 96 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.97□□□□□ -1.77
PMS1P54277 AP002770.2-201ENST00000543613 532 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AC093023.1-201ENST00000547375 507 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.97□□□□□ -1.77
PMS1P54277 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.97□□□□□ -1.77
PMS1P54277 AC090617.3-201ENST00000573670 475 ntBASIC3.97□□□□□ -1.77
PMS1P54277 MIR3128-201ENST00000581957 66 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AL451007.1-201ENST00000595491 289 ntBASIC3.97□□□□□ -1.77
PMS1P54277 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.97□□□□□ -1.77
PMS1P54277 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 AC073308.1-201ENST00000623696 305 ntBASIC3.97□□□□□ -1.77
PMS1P54277 U6.92-201ENST00000636464 89 ntBASIC3.97□□□□□ -1.77
PMS1P54277 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.97□□□□□ -1.77
PMS1P54277 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PMS1P54277 MTND5P6-201ENST00000422338 1798 ntBASIC3.97□□□□□ -1.77
PMS1P54277 OTUD4P1-201ENST00000237841 3067 ntBASIC3.96□□□□□ -1.77
PMS1P54277 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
PMS1P54277 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PMS1P54277 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PMS1P54277 RNU6-212P-201ENST00000362642 104 ntBASIC3.96□□□□□ -1.78
PMS1P54277 Y_RNA.105-201ENST00000363182 111 ntBASIC3.96□□□□□ -1.78
PMS1P54277 RNU1-140P-201ENST00000365040 165 ntBASIC3.96□□□□□ -1.78
PMS1P54277 Y_RNA.439-201ENST00000384119 94 ntBASIC3.96□□□□□ -1.78
PMS1P54277 RNY3P4-201ENST00000384428 101 ntBASIC3.96□□□□□ -1.78
PMS1P54277 RHEBP3-201ENST00000411920 351 ntBASIC3.96□□□□□ -1.78
PMS1P54277 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms