Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MIR4648-201ENST00000580107 72 ntBASIC2.09□□□□□ -2.07
EFNA3P52797 MIR5692A1-201ENST00000580523 69 ntBASIC2.09□□□□□ -2.07
EFNA3P52797 AP001330.5-201ENST00000607176 411 ntBASIC2.09□□□□□ -2.07
EFNA3P52797 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
EFNA3P52797 AL354950.2-201ENST00000617939 290 ntBASIC2.09□□□□□ -2.07
EFNA3P52797 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.09□□□□□ -2.07
EFNA3P52797 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.09□□□□□ -2.07
EFNA3P52797 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.09□□□□□ -2.07
EFNA3P52797 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
EFNA3P52797 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
EFNA3P52797 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
EFNA3P52797 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
EFNA3P52797 AL359854.1-201ENST00000614203 1594 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
EFNA3P52797 MIR412-201ENST00000362142 91 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 Y_RNA.372-201ENST00000365599 102 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 SNORA6-201ENST00000384033 151 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AC068050.1-201ENST00000394891 380 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 CALM2P3-201ENST00000400429 449 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 CIR1P3-201ENST00000405137 479 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AF274854.1-201ENST00000413236 615 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 MTND1P23-201ENST00000416931 372 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AL606489.2-201ENST00000433886 234 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EFNA3P52797 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.08□□□□□ -2.08
EFNA3P52797 AL360271.2-201ENST00000447710 161 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AC003071.1-201ENST00000451219 789 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.08□□□□□ -2.08
EFNA3P52797 AL163973.1-201ENST00000484753 577 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.08□□□□□ -2.08
EFNA3P52797 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.08□□□□□ -2.08
EFNA3P52797 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.08□□□□□ -2.08
EFNA3P52797 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.08□□□□□ -2.08
EFNA3P52797 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.08□□□□□ -2.08
EFNA3P52797 AC026464.5-201ENST00000562497 722 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AC008752.3-201ENST00000588113 712 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.08□□□□□ -2.08
EFNA3P52797 AC080078.2-201ENST00000603766 501 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.08□□□□□ -2.08
EFNA3P52797 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
EFNA3P52797 MIR6840-201ENST00000611937 71 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 HMGB1P24-202ENST00000615653 685 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 U4.5-201ENST00000617137 123 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 U6.42-201ENST00000618440 107 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EFNA3P52797 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
EFNA3P52797 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
EFNA3P52797 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
EFNA3P52797 SNORD14B-201ENST00000364533 90 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 Y_RNA.381-201ENST00000365666 102 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 SNORA67.3-201ENST00000384366 140 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 SNORD37.1-201ENST00000390968 65 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 RNU6-550P-201ENST00000391057 101 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.07□□□□□ -2.08
EFNA3P52797 BX276092.3-201ENST00000424182 230 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.07□□□□□ -2.08
EFNA3P52797 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.07□□□□□ -2.08
EFNA3P52797 AC096638.1-201ENST00000444678 216 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 FDX1P2-201ENST00000450769 375 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.07□□□□□ -2.08
EFNA3P52797 AL441985.1-201ENST00000457727 251 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 SNRPFP3-201ENST00000457792 225 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 RNU6-261P-201ENST00000459506 102 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC083798.1-201ENST00000472671 131 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 RPL36AP48-201ENST00000485521 314 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
EFNA3P52797 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.07□□□□□ -2.08
EFNA3P52797 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.07□□□□□ -2.08
EFNA3P52797 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.07□□□□□ -2.08
EFNA3P52797 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 Y_RNA.693-201ENST00000516641 110 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 SCARNA3-201ENST00000517097 143 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC104383.1-201ENST00000530297 370 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC010186.2-204ENST00000537668 439 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC136619.2-201ENST00000563361 631 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 HMGB1P33-201ENST00000563485 527 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC105137.2-201ENST00000569073 466 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.07□□□□□ -2.08
EFNA3P52797 MTATP6P3-201ENST00000581686 676 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC004492.1-201ENST00000607036 742 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AF250324.2-201ENST00000608299 610 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AP001596.2-201ENST00000608410 312 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC068792.1-201ENST00000621354 417 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC068137.3-201ENST00000639191 341 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC073869.6-201ENST00000640656 341 ntBASIC2.07□□□□□ -2.08
EFNA3P52797 AC010329.5-201ENST00000623497 2174 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
EFNA3P52797 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
EFNA3P52797 Y_RNA.9-201ENST00000362354 101 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 Y_RNA.255-201ENST00000364581 97 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 Y_RNA.505-201ENST00000384489 102 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 RNU6-748P-201ENST00000384648 107 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 RNU6-1158P-201ENST00000391167 107 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 RNU6-1140P-201ENST00000410517 106 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 UBE2V1P10-201ENST00000414685 269 ntBASIC2.06□□□□□ -2.08
EFNA3P52797 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.06□□□□□ -2.08
EFNA3P52797 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
EFNA3P52797 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms