Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.95□□□□□ -2.1
MSH6P52701 RPL23AP30-201ENST00000432419 501 ntBASIC1.95□□□□□ -2.1
MSH6P52701 CALM1P1-201ENST00000442082 433 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC003071.1-201ENST00000451219 789 ntBASIC1.95□□□□□ -2.1
MSH6P52701 RPS29P29-201ENST00000456396 171 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC023194.1-201ENST00000493084 308 ntBASIC1.95□□□□□ -2.1
MSH6P52701 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.95□□□□□ -2.1
MSH6P52701 FABP5P5-201ENST00000515537 406 ntBASIC1.95□□□□□ -2.1
MSH6P52701 OR5B19P-201ENST00000531766 928 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.95□□□□□ -2.1
MSH6P52701 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.95□□□□□ -2.1
MSH6P52701 AL157871.3-201ENST00000557231 293 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.95□□□□□ -2.1
MSH6P52701 MIR3660-201ENST00000584845 100 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AL022161.1-201ENST00000604390 213 ntBASIC1.95□□□□□ -2.1
MSH6P52701 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC131159.1-201ENST00000621854 213 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC138627.2-201ENST00000624202 601 ntBASIC1.95□□□□□ -2.1
MSH6P52701 AC025048.6-202ENST00000627667 438 ntBASIC1.95□□□□□ -2.1
MSH6P52701 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MSH6P52701 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MSH6P52701 SNORD114-27-201ENST00000363766 70 ntBASIC1.94□□□□□ -2.1
MSH6P52701 Y_RNA.374-201ENST00000365606 101 ntBASIC1.94□□□□□ -2.1
MSH6P52701 RNU6-898P-201ENST00000365627 104 ntBASIC1.94□□□□□ -2.1
MSH6P52701 MRPL42P2-201ENST00000403169 426 ntBASIC1.94□□□□□ -2.1
MSH6P52701 AC114491.1-201ENST00000416095 246 ntBASIC1.94□□□□□ -2.1
MSH6P52701 RPS15AP9-201ENST00000439856 381 ntBASIC1.94□□□□□ -2.1
MSH6P52701 AL078601.1-201ENST00000444542 271 ntBASIC1.94□□□□□ -2.1
MSH6P52701 PSPHP1-201ENST00000450062 261 ntBASIC1.94□□□□□ -2.1
MSH6P52701 USP9YP12-201ENST00000450481 570 ntBASIC1.94□□□□□ -2.1
MSH6P52701 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.94□□□□□ -2.1
MSH6P52701 DYNLL1P5-201ENST00000467158 270 ntBASIC1.94□□□□□ -2.1
MSH6P52701 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.94□□□□□ -2.1
MSH6P52701 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
MSH6P52701 RNU5B-3P-201ENST00000516601 115 ntBASIC1.94□□□□□ -2.1
MSH6P52701 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
MSH6P52701 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.94□□□□□ -2.1
MSH6P52701 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.94□□□□□ -2.1
MSH6P52701 AC084364.2-201ENST00000546924 395 ntBASIC1.94□□□□□ -2.1
MSH6P52701 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.94□□□□□ -2.1
MSH6P52701 AC012213.3-201ENST00000577199 777 ntBASIC1.94□□□□□ -2.1
MSH6P52701 HMGN1P30-201ENST00000589286 268 ntBASIC1.94□□□□□ -2.1
MSH6P52701 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.94□□□□□ -2.1
MSH6P52701 AC079248.2-201ENST00000623779 326 ntBASIC1.94□□□□□ -2.1
MSH6P52701 MIR6767-201ENST00000637302 66 ntBASIC1.94□□□□□ -2.1
MSH6P52701 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
MSH6P52701 Y_RNA.33-201ENST00000362591 102 ntBASIC1.93□□□□□ -2.1
MSH6P52701 RNU6-486P-201ENST00000363116 107 ntBASIC1.93□□□□□ -2.1
MSH6P52701 MIR320A-201ENST00000385302 82 ntBASIC1.93□□□□□ -2.1
MSH6P52701 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
MSH6P52701 AL031577.2-201ENST00000404133 280 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC097463.2-201ENST00000421074 142 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC119618.1-201ENST00000434191 222 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AL441985.1-201ENST00000457727 251 ntBASIC1.93□□□□□ -2.1
MSH6P52701 RNU7-125P-201ENST00000458760 62 ntBASIC1.93□□□□□ -2.1
MSH6P52701 RPL22P13-201ENST00000493291 347 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.93□□□□□ -2.1
MSH6P52701 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.93□□□□□ -2.1
MSH6P52701 MTND1P22-201ENST00000510572 951 ntBASIC1.93□□□□□ -2.1
MSH6P52701 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.93□□□□□ -2.1
MSH6P52701 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.93□□□□□ -2.1
MSH6P52701 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.93□□□□□ -2.1
MSH6P52701 RNA5SP112-201ENST00000515937 99 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.93□□□□□ -2.1
MSH6P52701 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MSH6P52701 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.93□□□□□ -2.1
MSH6P52701 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.93□□□□□ -2.1
MSH6P52701 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.93□□□□□ -2.1
MSH6P52701 AL353778.1-201ENST00000603149 408 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC112191.3-201ENST00000604371 277 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AL022154.1-201ENST00000604698 785 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC122133.1-201ENST00000613964 233 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC083806.3-201ENST00000614016 455 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC099654.13-201ENST00000639774 207 ntBASIC1.93□□□□□ -2.1
MSH6P52701 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.93□□□□□ -2.1
MSH6P52701 MTND4P4-201ENST00000439033 1366 ntBASIC1.93□□□□□ -2.1
MSH6P52701 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.92□□□□□ -2.1
MSH6P52701 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.92□□□□□ -2.1
MSH6P52701 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
MSH6P52701 RNU5E-1-201ENST00000362477 120 ntBASIC1.92□□□□□ -2.1
MSH6P52701 Y_RNA.205-201ENST00000364128 113 ntBASIC1.92□□□□□ -2.1
MSH6P52701 RNA5SP125-201ENST00000364843 120 ntBASIC1.92□□□□□ -2.1
MSH6P52701 RNU6-395P-201ENST00000365662 106 ntBASIC1.92□□□□□ -2.1
MSH6P52701 SNORA75B-201ENST00000384053 137 ntBASIC1.92□□□□□ -2.1
MSH6P52701 RNU6-190P-201ENST00000384154 102 ntBASIC1.92□□□□□ -2.1
MSH6P52701 RNU6-39P-201ENST00000384344 107 ntBASIC1.92□□□□□ -2.1
MSH6P52701 Y_RNA.560-201ENST00000384689 102 ntBASIC1.92□□□□□ -2.1
MSH6P52701 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
MSH6P52701 SNORA46.1-201ENST00000391069 153 ntBASIC1.92□□□□□ -2.1
MSH6P52701 MIR548J-201ENST00000408833 112 ntBASIC1.92□□□□□ -2.1
MSH6P52701 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.92□□□□□ -2.1
MSH6P52701 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.92□□□□□ -2.1
MSH6P52701 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.92□□□□□ -2.1
MSH6P52701 AC007283.2-201ENST00000424739 197 ntBASIC1.92□□□□□ -2.1
MSH6P52701 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
MSH6P52701 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.92□□□□□ -2.1
MSH6P52701 UBE2D3P4-201ENST00000441973 436 ntBASIC1.92□□□□□ -2.1
MSH6P52701 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.92□□□□□ -2.1
MSH6P52701 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.92□□□□□ -2.1
MSH6P52701 KATNBL1P6-201ENST00000453433 915 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms