Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLK2P49760 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLK2P49760 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.93□□□□□ -1.62
CLK2P49760 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLK2P49760 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.93□□□□□ -1.62
CLK2P49760 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLK2P49760 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLK2P49760 RNU6-324P-201ENST00000363957 106 ntBASIC4.93□□□□□ -1.62
CLK2P49760 Y_RNA.357-201ENST00000365487 109 ntBASIC4.93□□□□□ -1.62
CLK2P49760 SNORA62-201ENST00000365493 153 ntBASIC4.93□□□□□ -1.62
CLK2P49760 CBX3P9-201ENST00000402326 552 ntBASIC4.93□□□□□ -1.62
CLK2P49760 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.93□□□□□ -1.62
CLK2P49760 RNU2-2P-201ENST00000410396 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 RNU2-51P-201ENST00000410708 197 ntBASIC4.93□□□□□ -1.62
CLK2P49760 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.93□□□□□ -1.62
CLK2P49760 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.93□□□□□ -1.62
CLK2P49760 RPS27AP9-201ENST00000477681 438 ntBASIC4.93□□□□□ -1.62
CLK2P49760 AC005840.1-201ENST00000498412 377 ntBASIC4.93□□□□□ -1.62
CLK2P49760 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.93□□□□□ -1.62
CLK2P49760 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.93□□□□□ -1.62
CLK2P49760 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.93□□□□□ -1.62
CLK2P49760 RNU5F-2P-201ENST00000516066 82 ntBASIC4.93□□□□□ -1.62
CLK2P49760 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.93□□□□□ -1.62
CLK2P49760 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.93□□□□□ -1.62
CLK2P49760 AL034555.1-201ENST00000604816 211 ntBASIC4.93□□□□□ -1.62
CLK2P49760 RNU2-4P-201ENST00000606190 192 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.15-201ENST00000611544 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.16-201ENST00000613119 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.12-201ENST00000613778 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.9-201ENST00000615427 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.11-201ENST00000616345 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.2-201ENST00000616535 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.3-201ENST00000617785 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.19-201ENST00000618602 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 RNU2-1-201ENST00000618664 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 AL445567.2-201ENST00000618935 498 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.6-201ENST00000619225 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.5-201ENST00000619465 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 U2.10-201ENST00000620268 191 ntBASIC4.93□□□□□ -1.62
CLK2P49760 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLK2P49760 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.93□□□□□ -1.62
CLK2P49760 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLK2P49760 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLK2P49760 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CLK2P49760 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 Y_RNA.23-201ENST00000362496 106 ntBASIC4.92□□□□□ -1.62
CLK2P49760 Y_RNA.121-201ENST00000363309 113 ntBASIC4.92□□□□□ -1.62
CLK2P49760 RNA5SP175-201ENST00000364275 119 ntBASIC4.92□□□□□ -1.62
CLK2P49760 Y_RNA.329-201ENST00000365209 107 ntBASIC4.92□□□□□ -1.62
CLK2P49760 RNU6-1264P-201ENST00000383891 107 ntBASIC4.92□□□□□ -1.62
CLK2P49760 Y_RNA.400-201ENST00000383963 111 ntBASIC4.92□□□□□ -1.62
CLK2P49760 Y_RNA.497-201ENST00000384447 98 ntBASIC4.92□□□□□ -1.62
CLK2P49760 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.92□□□□□ -1.62
CLK2P49760 RPS4XP13-201ENST00000483219 789 ntBASIC4.92□□□□□ -1.62
CLK2P49760 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.92□□□□□ -1.62
CLK2P49760 RNU1-61P-201ENST00000516107 151 ntBASIC4.92□□□□□ -1.62
CLK2P49760 RNA5SP49-201ENST00000516450 115 ntBASIC4.92□□□□□ -1.62
CLK2P49760 RNA5SP73-201ENST00000516744 108 ntBASIC4.92□□□□□ -1.62
CLK2P49760 SNORD19.2-201ENST00000516978 73 ntBASIC4.92□□□□□ -1.62
CLK2P49760 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.92□□□□□ -1.62
CLK2P49760 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLK2P49760 AC023043.4-201ENST00000612081 449 ntBASIC4.92□□□□□ -1.62
CLK2P49760 FAM27D1-201ENST00000612308 341 ntBASIC4.92□□□□□ -1.62
CLK2P49760 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLK2P49760 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLK2P49760 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CLK2P49760 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 MAPK10-349ENST00000641767 3661 ntBASIC4.92□□□□□ -1.62
CLK2P49760 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.92□□□□□ -1.62
CLK2P49760 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLK2P49760 AL022322.2-201ENST00000624072 20397 ntBASIC4.91□□□□□ -1.62
CLK2P49760 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLK2P49760 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLK2P49760 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLK2P49760 RNU1-14P-201ENST00000362759 152 ntBASIC4.91□□□□□ -1.62
CLK2P49760 Y_RNA.75-201ENST00000362927 97 ntBASIC4.91□□□□□ -1.62
CLK2P49760 Y_RNA.182-201ENST00000363880 111 ntBASIC4.91□□□□□ -1.62
CLK2P49760 Y_RNA.412-201ENST00000384001 104 ntBASIC4.91□□□□□ -1.62
CLK2P49760 Y_RNA.488-201ENST00000384403 102 ntBASIC4.91□□□□□ -1.62
CLK2P49760 RNU6-748P-201ENST00000384648 107 ntBASIC4.91□□□□□ -1.62
CLK2P49760 RNU6-19P-201ENST00000384718 107 ntBASIC4.91□□□□□ -1.62
CLK2P49760 SNORD66.1-201ENST00000391230 76 ntBASIC4.91□□□□□ -1.62
CLK2P49760 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.91□□□□□ -1.62
CLK2P49760 AL353748.1-201ENST00000440753 474 ntBASIC4.91□□□□□ -1.62
CLK2P49760 AL441985.1-201ENST00000457727 251 ntBASIC4.91□□□□□ -1.62
CLK2P49760 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.91□□□□□ -1.62
CLK2P49760 snoU13.28-201ENST00000459235 104 ntBASIC4.91□□□□□ -1.62
CLK2P49760 AC109327.1-201ENST00000471666 403 ntBASIC4.91□□□□□ -1.62
CLK2P49760 RN7SL860P-201ENST00000473738 223 ntBASIC4.91□□□□□ -1.62
CLK2P49760 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLK2P49760 RNU6-107P-201ENST00000516643 102 ntBASIC4.91□□□□□ -1.62
CLK2P49760 FTH1P11-201ENST00000517577 551 ntBASIC4.91□□□□□ -1.62
CLK2P49760 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.91□□□□□ -1.62
CLK2P49760 AC027176.1-201ENST00000560204 514 ntBASIC4.91□□□□□ -1.62
CLK2P49760 AC091895.1-201ENST00000624494 256 ntBASIC4.91□□□□□ -1.62
CLK2P49760 MIR3653-201ENST00000625572 110 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms