Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RPS3AP12-201ENST00000443616 753 ntBASIC2.67□□□□□ -1.98
CLK1P49759 PRPS1P1-201ENST00000445305 876 ntBASIC2.67□□□□□ -1.98
CLK1P49759 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.67□□□□□ -1.98
CLK1P49759 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.67□□□□□ -1.98
CLK1P49759 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.67□□□□□ -1.98
CLK1P49759 RNU6-1208P-201ENST00000459588 107 ntBASIC2.67□□□□□ -1.98
CLK1P49759 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.67□□□□□ -1.98
CLK1P49759 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.67□□□□□ -1.98
CLK1P49759 Y_RNA.691-201ENST00000516611 103 ntBASIC2.67□□□□□ -1.98
CLK1P49759 RNU6-143P-201ENST00000516942 93 ntBASIC2.67□□□□□ -1.98
CLK1P49759 HPRT1P3-201ENST00000539521 576 ntBASIC2.67□□□□□ -1.98
CLK1P49759 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.67□□□□□ -1.98
CLK1P49759 AC092807.2-201ENST00000609367 243 ntBASIC2.67□□□□□ -1.98
CLK1P49759 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.67□□□□□ -1.98
CLK1P49759 uc_338.5-201ENST00000611839 155 ntBASIC2.67□□□□□ -1.98
CLK1P49759 AP003400.5-201ENST00000624827 617 ntBASIC2.67□□□□□ -1.98
CLK1P49759 TPTEP1-208ENST00000636884 213 ntBASIC2.67□□□□□ -1.98
CLK1P49759 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
CLK1P49759 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLK1P49759 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLK1P49759 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.66□□□□□ -1.98
CLK1P49759 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.66□□□□□ -1.98
CLK1P49759 AC121333.1-201ENST00000567488 2709 ntBASIC2.66□□□□□ -1.98
CLK1P49759 MIR208A-201ENST00000362287 71 ntBASIC2.66□□□□□ -1.98
CLK1P49759 RNU4-79P-201ENST00000362764 141 ntBASIC2.66□□□□□ -1.98
CLK1P49759 RNU6-1287P-201ENST00000362914 107 ntBASIC2.66□□□□□ -1.98
CLK1P49759 Y_RNA.100-201ENST00000363141 102 ntBASIC2.66□□□□□ -1.98
CLK1P49759 RNU6-1127P-201ENST00000384580 107 ntBASIC2.66□□□□□ -1.98
CLK1P49759 RNU6-1060P-201ENST00000384664 107 ntBASIC2.66□□□□□ -1.98
CLK1P49759 AL139397.2-201ENST00000404529 772 ntBASIC2.66□□□□□ -1.98
CLK1P49759 SNORD23.1-201ENST00000408212 104 ntBASIC2.66□□□□□ -1.98
CLK1P49759 AL365400.1-201ENST00000431854 640 ntBASIC2.66□□□□□ -1.98
CLK1P49759 NEFMP1-201ENST00000443423 1006 ntBASIC2.66□□□□□ -1.98
CLK1P49759 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.66□□□□□ -1.98
CLK1P49759 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.66□□□□□ -1.98
CLK1P49759 CKS1BP2-201ENST00000497342 240 ntBASIC2.66□□□□□ -1.98
CLK1P49759 RNU6-123P-201ENST00000516163 102 ntBASIC2.66□□□□□ -1.98
CLK1P49759 RNU6-703P-201ENST00000516946 107 ntBASIC2.66□□□□□ -1.98
CLK1P49759 MTND4P7-201ENST00000523876 130 ntBASIC2.66□□□□□ -1.98
CLK1P49759 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.66□□□□□ -1.98
CLK1P49759 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.66□□□□□ -1.98
CLK1P49759 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
CLK1P49759 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLK1P49759 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.66□□□□□ -1.98
CLK1P49759 AC044792.1-201ENST00000593294 196 ntBASIC2.66□□□□□ -1.98
CLK1P49759 AL133216.2-202ENST00000634512 349 ntBASIC2.66□□□□□ -1.98
CLK1P49759 MTND5P42-201ENST00000637720 498 ntBASIC2.66□□□□□ -1.98
CLK1P49759 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.66□□□□□ -1.98
CLK1P49759 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CLK1P49759 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
CLK1P49759 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.65□□□□□ -1.99
CLK1P49759 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLK1P49759 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLK1P49759 RNU1-35P-201ENST00000362782 153 ntBASIC2.65□□□□□ -1.99
CLK1P49759 RNU6-512P-201ENST00000364438 103 ntBASIC2.65□□□□□ -1.99
CLK1P49759 RNU6-748P-201ENST00000384648 107 ntBASIC2.65□□□□□ -1.99
CLK1P49759 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CLK1P49759 HMGB1P18-201ENST00000438801 619 ntBASIC2.65□□□□□ -1.99
CLK1P49759 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.65□□□□□ -1.99
CLK1P49759 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.65□□□□□ -1.99
CLK1P49759 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.65□□□□□ -1.99
CLK1P49759 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.65□□□□□ -1.99
CLK1P49759 AC083904.1-201ENST00000487828 231 ntBASIC2.65□□□□□ -1.99
CLK1P49759 Y_RNA.654-201ENST00000497848 106 ntBASIC2.65□□□□□ -1.99
CLK1P49759 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.65□□□□□ -1.99
CLK1P49759 Y_RNA.675-201ENST00000516389 149 ntBASIC2.65□□□□□ -1.99
CLK1P49759 RN7SKP256-201ENST00000517201 314 ntBASIC2.65□□□□□ -1.99
CLK1P49759 SNORA70.24-201ENST00000517233 118 ntBASIC2.65□□□□□ -1.99
CLK1P49759 AC009812.2-201ENST00000517657 457 ntBASIC2.65□□□□□ -1.99
CLK1P49759 RANP3-201ENST00000530970 276 ntBASIC2.65□□□□□ -1.99
CLK1P49759 OR11H5P-201ENST00000554039 926 ntBASIC2.65□□□□□ -1.99
CLK1P49759 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.65□□□□□ -1.99
CLK1P49759 AC026464.5-201ENST00000562497 722 ntBASIC2.65□□□□□ -1.99
CLK1P49759 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.65□□□□□ -1.99
CLK1P49759 AL050343.2-201ENST00000607338 280 ntBASIC2.65□□□□□ -1.99
CLK1P49759 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.65□□□□□ -1.99
CLK1P49759 HSPA8P4-201ENST00000511877 1920 ntBASIC2.65□□□□□ -1.99
CLK1P49759 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLK1P49759 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CLK1P49759 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.64□□□□□ -1.99
CLK1P49759 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLK1P49759 Y_RNA.301-201ENST00000364990 103 ntBASIC2.64□□□□□ -1.99
CLK1P49759 RNA5SP240-201ENST00000365355 128 ntBASIC2.64□□□□□ -1.99
CLK1P49759 Y_RNA.373-201ENST00000365600 103 ntBASIC2.64□□□□□ -1.99
CLK1P49759 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK1P49759 RNU6-190P-201ENST00000384154 102 ntBASIC2.64□□□□□ -1.99
CLK1P49759 Y_RNA.530-201ENST00000384587 101 ntBASIC2.64□□□□□ -1.99
CLK1P49759 SNORA16.2-201ENST00000390991 127 ntBASIC2.64□□□□□ -1.99
CLK1P49759 RNU6-817P-201ENST00000391083 104 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AL355497.1-201ENST00000406262 551 ntBASIC2.64□□□□□ -1.99
CLK1P49759 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.64□□□□□ -1.99
CLK1P49759 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
CLK1P49759 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.64□□□□□ -1.99
CLK1P49759 ARL5AP1-201ENST00000418991 388 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AL669831.1-202ENST00000428504 417 ntBASIC2.64□□□□□ -1.99
CLK1P49759 CALM2P2-201ENST00000428512 440 ntBASIC2.64□□□□□ -1.99
CLK1P49759 AC022018.1-201ENST00000430685 241 ntBASIC2.64□□□□□ -1.99
CLK1P49759 GTF2IP13-201ENST00000438487 386 ntBASIC2.64□□□□□ -1.99
CLK1P49759 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.64□□□□□ -1.99
CLK1P49759 AC104058.1-201ENST00000448028 297 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms