Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MTCO2P20-201ENST00000437339 673 ntBASIC-0.11□□□□□ -2.43
HTTP42858 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 MIR548Y-201ENST00000582739 110 ntBASIC-0.11□□□□□ -2.43
HTTP42858 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.11□□□□□ -2.43
HTTP42858 AC068057.2-201ENST00000624047 895 ntBASIC-0.11□□□□□ -2.43
HTTP42858 RNY4P6-201ENST00000363667 96 ntBASIC-0.11□□□□□ -2.43
HTTP42858 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.11□□□□□ -2.43
HTTP42858 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 AL589872.1-201ENST00000426602 288 ntBASIC-0.11□□□□□ -2.43
HTTP42858 GTF2IP20-201ENST00000431663 360 ntBASIC-0.11□□□□□ -2.43
HTTP42858 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.11□□□□□ -2.43
HTTP42858 RNU6-138P-201ENST00000515952 107 ntBASIC-0.11□□□□□ -2.43
HTTP42858 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 AC016256.1-201ENST00000547971 354 ntBASIC-0.11□□□□□ -2.43
HTTP42858 AC012669.1-201ENST00000603209 283 ntBASIC-0.11□□□□□ -2.43
HTTP42858 RNU6-156P-201ENST00000621869 107 ntBASIC-0.11□□□□□ -2.43
HTTP42858 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
HTTP42858 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.11□□□□□ -2.43
HTTP42858 MIR1262-201ENST00000408276 93 ntBASIC-0.11□□□□□ -2.43
HTTP42858 MTCO3P12-201ENST00000416718 547 ntBASIC-0.11□□□□□ -2.43
HTTP42858 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
HTTP42858 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.11□□□□□ -2.43
HTTP42858 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.11□□□□□ -2.43
HTTP42858 FCF1P6-201ENST00000456841 595 ntBASIC-0.11□□□□□ -2.43
HTTP42858 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.11□□□□□ -2.43
HTTP42858 AC007751.1-201ENST00000529260 376 ntBASIC-0.11□□□□□ -2.43
HTTP42858 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.11□□□□□ -2.43
HTTP42858 MIR140-201ENST00000385282 100 ntBASIC-0.12□□□□□ -2.43
HTTP42858 MIR1283-2-201ENST00000408621 87 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AC139712.2-201ENST00000424302 339 ntBASIC-0.12□□□□□ -2.43
HTTP42858 MTCO2P12-201ENST00000427426 682 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.12□□□□□ -2.43
HTTP42858 RNU7-90P-201ENST00000459216 62 ntBASIC-0.12□□□□□ -2.43
HTTP42858 RNA5SP134-201ENST00000516492 96 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.12□□□□□ -2.43
HTTP42858 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.12□□□□□ -2.43
HTTP42858 AC026271.5-201ENST00000577873 130 ntBASIC-0.12□□□□□ -2.43
HTTP42858 MIR5094-201ENST00000578766 85 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.12□□□□□ -2.43
HTTP42858 AP000403.1-201ENST00000603349 851 ntBASIC-0.12□□□□□ -2.43
HTTP42858 BX284668.6-201ENST00000606899 438 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.12□□□□□ -2.43
HTTP42858 AC040168.1-201ENST00000623594 991 ntBASIC-0.12□□□□□ -2.43
HTTP42858 RNU6-251P-201ENST00000363235 104 ntBASIC-0.12□□□□□ -2.43
HTTP42858 RNA5SP56-201ENST00000410277 118 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AL590556.1-201ENST00000423231 483 ntBASIC-0.12□□□□□ -2.43
HTTP42858 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.12□□□□□ -2.43
HTTP42858 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
HTTP42858 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HTTP42858 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.12□□□□□ -2.43
HTTP42858 RPL30P7-201ENST00000479312 323 ntBASIC-0.12□□□□□ -2.43
HTTP42858 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HTTP42858 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.13□□□□□ -2.43
HTTP42858 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.13□□□□□ -2.43
HTTP42858 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.13□□□□□ -2.43
HTTP42858 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.13□□□□□ -2.43
HTTP42858 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
HTTP42858 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.13□□□□□ -2.43
HTTP42858 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.13□□□□□ -2.43
HTTP42858 HSPA8P13-201ENST00000523715 472 ntBASIC-0.13□□□□□ -2.43
HTTP42858 CYCSP27-201ENST00000527643 293 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AC025423.2-201ENST00000537570 439 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AL713998.2-201ENST00000604538 1198 ntBASIC-0.13□□□□□ -2.43
HTTP42858 PART1_2.1-201ENST00000612397 250 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.13□□□□□ -2.43
HTTP42858 MIRLET7D-201ENST00000362263 87 ntBASIC-0.13□□□□□ -2.43
HTTP42858 RN7SKP266-201ENST00000410232 287 ntBASIC-0.13□□□□□ -2.43
HTTP42858 RPS3AP1-201ENST00000413190 320 ntBASIC-0.13□□□□□ -2.43
HTTP42858 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.13□□□□□ -2.43
HTTP42858 RNU6-165P-201ENST00000517170 99 ntBASIC-0.13□□□□□ -2.43
HTTP42858 RNA5SP437-201ENST00000517249 129 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AC060771.1-201ENST00000582031 164 ntBASIC-0.13□□□□□ -2.43
HTTP42858 BNIP3P27-201ENST00000599991 412 ntBASIC-0.13□□□□□ -2.43
HTTP42858 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
HTTP42858 MTCO3P5-201ENST00000433620 714 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.13□□□□□ -2.43
HTTP42858 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.13□□□□□ -2.43
HTTP42858 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.13□□□□□ -2.43
HTTP42858 HMGN1P13-201ENST00000505795 138 ntBASIC-0.13□□□□□ -2.43
HTTP42858 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.13□□□□□ -2.43
HTTP42858 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.13□□□□□ -2.43
HTTP42858 AC021739.1-201ENST00000559631 174 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AP000238.1-201ENST00000608759 426 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AC021506.2-201ENST00000612354 169 ntBASIC-0.13□□□□□ -2.43
HTTP42858 uc_338.15-201ENST00000615470 191 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AL590240.4-201ENST00000616908 390 ntBASIC-0.13□□□□□ -2.43
HTTP42858 AL596245.1-201ENST00000618994 362 ntBASIC-0.13□□□□□ -2.43
HTTP42858 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
HTTP42858 RNU6-884P-201ENST00000363889 107 ntBASIC-0.14□□□□□ -2.43
HTTP42858 MTCO2P8-201ENST00000412213 658 ntBASIC-0.14□□□□□ -2.43
HTTP42858 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AC073261.1-201ENST00000429409 121 ntBASIC-0.14□□□□□ -2.43
HTTP42858 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.14□□□□□ -2.43
HTTP42858 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.14□□□□□ -2.43
HTTP42858 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.14□□□□□ -2.43
HTTP42858 BRK1P2-201ENST00000442875 223 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms