Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.82□□□□□ -2.12
RORAP35398 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.82□□□□□ -2.12
RORAP35398 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
RORAP35398 AC093788.1-201ENST00000609356 927 ntBASIC1.82□□□□□ -2.12
RORAP35398 AC022202.1-201ENST00000613515 211 ntBASIC1.82□□□□□ -2.12
RORAP35398 U6.42-201ENST00000618440 107 ntBASIC1.82□□□□□ -2.12
RORAP35398 AC008121.3-201ENST00000618726 433 ntBASIC1.82□□□□□ -2.12
RORAP35398 AL354685.2-201ENST00000448218 1447 ntBASIC1.82□□□□□ -2.12
RORAP35398 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RORAP35398 RNU1-23P-201ENST00000363361 144 ntBASIC1.81□□□□□ -2.12
RORAP35398 RNA5SP99-201ENST00000364020 114 ntBASIC1.81□□□□□ -2.12
RORAP35398 RNY4P34-201ENST00000364779 95 ntBASIC1.81□□□□□ -2.12
RORAP35398 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.81□□□□□ -2.12
RORAP35398 RNU6-622P-201ENST00000384272 103 ntBASIC1.81□□□□□ -2.12
RORAP35398 RNU1-57P-201ENST00000384491 166 ntBASIC1.81□□□□□ -2.12
RORAP35398 RNU6-1179P-201ENST00000384667 107 ntBASIC1.81□□□□□ -2.12
RORAP35398 RNU2-8P-201ENST00000410727 190 ntBASIC1.81□□□□□ -2.12
RORAP35398 HMGN1P14-201ENST00000412459 517 ntBASIC1.81□□□□□ -2.12
RORAP35398 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
RORAP35398 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
RORAP35398 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.81□□□□□ -2.12
RORAP35398 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.81□□□□□ -2.12
RORAP35398 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.81□□□□□ -2.12
RORAP35398 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.81□□□□□ -2.12
RORAP35398 GAPDHP17-201ENST00000449858 1001 ntBASIC1.81□□□□□ -2.12
RORAP35398 snoU109.1-201ENST00000459339 135 ntBASIC1.81□□□□□ -2.12
RORAP35398 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.81□□□□□ -2.12
RORAP35398 HMGB1P35-201ENST00000503360 598 ntBASIC1.81□□□□□ -2.12
RORAP35398 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.81□□□□□ -2.12
RORAP35398 Y_RNA.687-201ENST00000516558 91 ntBASIC1.81□□□□□ -2.12
RORAP35398 SNORA31.23-201ENST00000517219 133 ntBASIC1.81□□□□□ -2.12
RORAP35398 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.81□□□□□ -2.12
RORAP35398 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.81□□□□□ -2.12
RORAP35398 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.81□□□□□ -2.12
RORAP35398 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
RORAP35398 AC026271.5-201ENST00000577873 130 ntBASIC1.81□□□□□ -2.12
RORAP35398 AC073539.2-201ENST00000597113 165 ntBASIC1.81□□□□□ -2.12
RORAP35398 AC073410.2-201ENST00000603240 332 ntBASIC1.81□□□□□ -2.12
RORAP35398 BNIP3P10-201ENST00000605360 577 ntBASIC1.81□□□□□ -2.12
RORAP35398 AC021646.1-201ENST00000605469 484 ntBASIC1.81□□□□□ -2.12
RORAP35398 AL133173.2-201ENST00000614270 90 ntBASIC1.81□□□□□ -2.12
RORAP35398 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.81□□□□□ -2.12
RORAP35398 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.81□□□□□ -2.12
RORAP35398 HAUS6P2-201ENST00000433254 2404 ntBASIC1.81□□□□□ -2.12
RORAP35398 ZNF72P-201ENST00000425869 1908 ntBASIC1.81□□□□□ -2.12
RORAP35398 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
RORAP35398 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
RORAP35398 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RORAP35398 Y_RNA.40-201ENST00000362645 93 ntBASIC1.8□□□□□ -2.12
RORAP35398 RNU6-1010P-201ENST00000362757 107 ntBASIC1.8□□□□□ -2.12
RORAP35398 RNY1P12-201ENST00000364251 105 ntBASIC1.8□□□□□ -2.12
RORAP35398 Y_RNA.367-201ENST00000365544 101 ntBASIC1.8□□□□□ -2.12
RORAP35398 RNU5A-2P-201ENST00000384337 116 ntBASIC1.8□□□□□ -2.12
RORAP35398 Y_RNA.576-201ENST00000384781 102 ntBASIC1.8□□□□□ -2.12
RORAP35398 MT-TH-201ENST00000387441 69 ntBASIC1.8□□□□□ -2.12
RORAP35398 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
RORAP35398 EIF1AXP1-201ENST00000419267 435 ntBASIC1.8□□□□□ -2.12
RORAP35398 AL445685.2-201ENST00000422551 342 ntBASIC1.8□□□□□ -2.12
RORAP35398 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.8□□□□□ -2.12
RORAP35398 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.8□□□□□ -2.12
RORAP35398 MTCO3P5-201ENST00000433620 714 ntBASIC1.8□□□□□ -2.12
RORAP35398 RPL7P54-201ENST00000438336 674 ntBASIC1.8□□□□□ -2.12
RORAP35398 AC073614.1-201ENST00000438690 650 ntBASIC1.8□□□□□ -2.12
RORAP35398 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.8□□□□□ -2.12
RORAP35398 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
RORAP35398 Y_RNA.638-201ENST00000459374 113 ntBASIC1.8□□□□□ -2.12
RORAP35398 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.8□□□□□ -2.12
RORAP35398 AC116562.3-201ENST00000506136 177 ntBASIC1.8□□□□□ -2.12
RORAP35398 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
RORAP35398 Vault.3-201ENST00000516676 95 ntBASIC1.8□□□□□ -2.12
RORAP35398 AC068587.5-201ENST00000528506 175 ntBASIC1.8□□□□□ -2.12
RORAP35398 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.8□□□□□ -2.12
RORAP35398 CR383656.8-201ENST00000549046 145 ntBASIC1.8□□□□□ -2.12
RORAP35398 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.8□□□□□ -2.12
RORAP35398 AC008250.2-201ENST00000615261 205 ntBASIC1.8□□□□□ -2.12
RORAP35398 AL353997.5-201ENST00000618886 171 ntBASIC1.8□□□□□ -2.12
RORAP35398 SCARNA4-202ENST00000625402 129 ntBASIC1.8□□□□□ -2.12
RORAP35398 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.8□□□□□ -2.12
RORAP35398 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
RORAP35398 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RORAP35398 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.79□□□□□ -2.12
RORAP35398 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
RORAP35398 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RORAP35398 SNORD115-7-201ENST00000365306 82 ntBASIC1.79□□□□□ -2.12
RORAP35398 RNU6-487P-201ENST00000365430 104 ntBASIC1.79□□□□□ -2.12
RORAP35398 SNORA26.8-201ENST00000391306 124 ntBASIC1.79□□□□□ -2.12
RORAP35398 RNU6-248P-201ENST00000410720 107 ntBASIC1.79□□□□□ -2.12
RORAP35398 RNA5SP450-201ENST00000411206 102 ntBASIC1.79□□□□□ -2.12
RORAP35398 UBE2V1P10-201ENST00000414685 269 ntBASIC1.79□□□□□ -2.12
RORAP35398 MTND3P17-201ENST00000416968 344 ntBASIC1.79□□□□□ -2.12
RORAP35398 MTND2P18-201ENST00000419962 1030 ntBASIC1.79□□□□□ -2.12
RORAP35398 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
RORAP35398 ISCA1P6-201ENST00000427740 390 ntBASIC1.79□□□□□ -2.12
RORAP35398 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.79□□□□□ -2.12
RORAP35398 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.79□□□□□ -2.12
RORAP35398 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.79□□□□□ -2.12
RORAP35398 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.79□□□□□ -2.12
RORAP35398 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.79□□□□□ -2.12
RORAP35398 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.79□□□□□ -2.12
RORAP35398 AC093249.1-201ENST00000567049 203 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms