Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC134050.1-201ENST00000495088 933 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 RNU6-1092P-201ENST00000516955 87 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
SDC4P31431 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 AL137100.2-201ENST00000555786 315 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 VN1R83P-201ENST00000595685 445 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AC005332.6-201ENST00000613178 446 ntBASIC0.59□□□□□ -2.31
SDC4P31431 AL590240.4-201ENST00000616908 390 ntBASIC0.59□□□□□ -2.31
SDC4P31431 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.59□□□□□ -2.31
SDC4P31431 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SDC4P31431 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
SDC4P31431 SNORD114-6-201ENST00000364393 72 ntBASIC0.58□□□□□ -2.32
SDC4P31431 RNU4-27P-201ENST00000410889 139 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.58□□□□□ -2.32
SDC4P31431 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.58□□□□□ -2.32
SDC4P31431 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.58□□□□□ -2.32
SDC4P31431 SNX2P2-201ENST00000424553 323 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.58□□□□□ -2.32
SDC4P31431 HSPE1P9-201ENST00000440046 311 ntBASIC0.58□□□□□ -2.32
SDC4P31431 KATNBL1P3-201ENST00000443475 909 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.58□□□□□ -2.32
SDC4P31431 MRPL42P4-201ENST00000453267 443 ntBASIC0.58□□□□□ -2.32
SDC4P31431 RNU6-333P-201ENST00000459117 107 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AC130509.1-201ENST00000464158 433 ntBASIC0.58□□□□□ -2.32
SDC4P31431 MED28P2-201ENST00000475771 317 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AC104629.1-201ENST00000494226 508 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.58□□□□□ -2.32
SDC4P31431 AC006518.2-201ENST00000542513 940 ntBASIC0.58□□□□□ -2.32
SDC4P31431 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.58□□□□□ -2.32
SDC4P31431 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.58□□□□□ -2.32
SDC4P31431 AC112220.2-201ENST00000605513 533 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AC018926.1-201ENST00000616335 435 ntBASIC0.58□□□□□ -2.32
SDC4P31431 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.58□□□□□ -2.32
SDC4P31431 AC099654.9-201ENST00000637055 678 ntBASIC0.58□□□□□ -2.32
SDC4P31431 RNU6-843P-201ENST00000384454 104 ntBASIC0.57□□□□□ -2.32
SDC4P31431 MIR19B1-201ENST00000384829 87 ntBASIC0.57□□□□□ -2.32
SDC4P31431 RPL21P1-201ENST00000399532 476 ntBASIC0.57□□□□□ -2.32
SDC4P31431 RPL21P24-201ENST00000413752 448 ntBASIC0.57□□□□□ -2.32
SDC4P31431 RPL21P111-201ENST00000418453 477 ntBASIC0.57□□□□□ -2.32
SDC4P31431 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.57□□□□□ -2.32
SDC4P31431 DPRXP1-201ENST00000426312 460 ntBASIC0.57□□□□□ -2.32
SDC4P31431 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.57□□□□□ -2.32
SDC4P31431 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.57□□□□□ -2.32
SDC4P31431 snoU13.14-201ENST00000459372 104 ntBASIC0.57□□□□□ -2.32
SDC4P31431 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SDC4P31431 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.57□□□□□ -2.32
SDC4P31431 TRBVA-201ENST00000498804 316 ntBASIC0.57□□□□□ -2.32
SDC4P31431 RNU6-572P-201ENST00000516724 80 ntBASIC0.57□□□□□ -2.32
SDC4P31431 RNA5SP490-201ENST00000517141 136 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AC009902.1-201ENST00000519351 183 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.57□□□□□ -2.32
SDC4P31431 AC137800.2-201ENST00000574375 120 ntBASIC0.57□□□□□ -2.32
SDC4P31431 MTCO2P2-201ENST00000591258 225 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AC100814.1-201ENST00000606963 623 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AL157770.1-201ENST00000623049 439 ntBASIC0.57□□□□□ -2.32
SDC4P31431 MIR1248-201ENST00000629190 106 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AC107982.1-201ENST00000507171 1300 ntBASIC0.57□□□□□ -2.32
SDC4P31431 AC027514.1-201ENST00000588561 1603 ntBASIC0.56□□□□□ -2.32
SDC4P31431 MIR548B-201ENST00000385247 97 ntBASIC0.56□□□□□ -2.32
SDC4P31431 RNU6-952P-201ENST00000391164 108 ntBASIC0.56□□□□□ -2.32
SDC4P31431 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
SDC4P31431 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
SDC4P31431 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SDC4P31431 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.56□□□□□ -2.32
SDC4P31431 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.56□□□□□ -2.32
SDC4P31431 RAP1BP2-201ENST00000478270 544 ntBASIC0.56□□□□□ -2.32
SDC4P31431 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.56□□□□□ -2.32
SDC4P31431 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
SDC4P31431 RN7SKP88-201ENST00000516847 250 ntBASIC0.56□□□□□ -2.32
SDC4P31431 OR6C7P-201ENST00000547875 934 ntBASIC0.56□□□□□ -2.32
SDC4P31431 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SDC4P31431 MIR5000-201ENST00000577717 103 ntBASIC0.56□□□□□ -2.32
SDC4P31431 MIR5094-201ENST00000578766 85 ntBASIC0.56□□□□□ -2.32
SDC4P31431 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.56□□□□□ -2.32
SDC4P31431 KATNBL1P5-201ENST00000605015 517 ntBASIC0.56□□□□□ -2.32
SDC4P31431 7SK.8-201ENST00000612110 250 ntBASIC0.56□□□□□ -2.32
SDC4P31431 7SK.11-201ENST00000615477 250 ntBASIC0.56□□□□□ -2.32
SDC4P31431 7SK.13-201ENST00000622040 250 ntBASIC0.56□□□□□ -2.32
SDC4P31431 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.56□□□□□ -2.32
SDC4P31431 MTND4P16-201ENST00000466108 1367 ntBASIC0.56□□□□□ -2.32
SDC4P31431 MIR520A-201ENST00000384862 85 ntBASIC0.55□□□□□ -2.32
SDC4P31431 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SDC4P31431 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.55□□□□□ -2.32
SDC4P31431 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.55□□□□□ -2.32
SDC4P31431 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.55□□□□□ -2.32
SDC4P31431 RNU7-136P-201ENST00000458819 69 ntBASIC0.55□□□□□ -2.32
SDC4P31431 RNA5SP269-201ENST00000459032 137 ntBASIC0.55□□□□□ -2.32
SDC4P31431 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.55□□□□□ -2.32
SDC4P31431 AC023538.1-201ENST00000534576 736 ntBASIC0.55□□□□□ -2.32
SDC4P31431 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.55□□□□□ -2.32
SDC4P31431 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.55□□□□□ -2.32
SDC4P31431 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.55□□□□□ -2.32
SDC4P31431 AC025678.1-201ENST00000567861 338 ntBASIC0.55□□□□□ -2.32
SDC4P31431 MIR4789-201ENST00000577469 82 ntBASIC0.55□□□□□ -2.32
SDC4P31431 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms