Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC3P19447 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC3P19447 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC3P19447 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC3P19447 RNA5SP51-201ENST00000364750 119 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 SNORA14A-201ENST00000364773 135 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 SNORA69.1-201ENST00000390904 137 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 RNU6-101P-201ENST00000410323 104 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
ERCC3P19447 TOMM22P6-201ENST00000465035 409 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 AP001025.1-201ENST00000486139 332 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC3P19447 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC3P19447 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC3P19447 MTND4LP22-201ENST00000508209 276 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 RNU6-764P-201ENST00000516396 105 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 RNU4-77P-201ENST00000516692 156 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 AC090897.2-201ENST00000581715 130 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 AL591424.2-201ENST00000617023 128 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 AC091953.5-201ENST00000622919 233 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 HAUS6P2-201ENST00000433254 2404 ntBASIC4.38□□□□□ -1.71
ERCC3P19447 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
ERCC3P19447 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC3P19447 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC3P19447 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC3P19447 AC008669.1-201ENST00000565823 2178 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ERCC3P19447 RNU6-450P-201ENST00000364654 107 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 RNU6-1222P-201ENST00000384615 107 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 EI24P2-201ENST00000397776 1076 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 AL356057.3-201ENST00000402607 340 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 RNA5SP390-201ENST00000410191 113 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 RN7SL293P-201ENST00000481765 281 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 AC016632.1-201ENST00000503994 196 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 RN7SKP18-201ENST00000516005 275 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 RNA5SP164-201ENST00000516533 110 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 RNU1-30P-201ENST00000606575 163 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 AC100812.1-201ENST00000607622 580 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 AL359198.2-201ENST00000611836 194 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 AC007792.1-201ENST00000623023 402 ntBASIC4.37□□□□□ -1.71
ERCC3P19447 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.37□□□□□ -1.71
ERCC3P19447 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.37□□□□□ -1.71
ERCC3P19447 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC3P19447 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC3P19447 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERCC3P19447 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ERCC3P19447 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERCC3P19447 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.36□□□□□ -1.71
ERCC3P19447 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERCC3P19447 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERCC3P19447 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ERCC3P19447 RNU4-42P-201ENST00000364738 142 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RNU4-9P-201ENST00000364951 139 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 MIR32-201ENST00000384965 70 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ERCC3P19447 SNORA12.2-201ENST00000391040 156 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RNU6-985P-201ENST00000410182 104 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 Z82188.1-201ENST00000436709 154 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 AC244670.1-201ENST00000436879 112 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RPS3AP12-201ENST00000443616 753 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.36□□□□□ -1.71
ERCC3P19447 MTND5P22-201ENST00000458380 195 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RPS4XP22-201ENST00000480755 780 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.36□□□□□ -1.71
ERCC3P19447 RPL30P10-201ENST00000488148 337 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RPS27P26-201ENST00000494583 239 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RNU6-1046P-201ENST00000516538 107 ntBASIC4.36□□□□□ -1.71
ERCC3P19447 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ERCC3P19447 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.36□□□□□ -1.71
ERCC3P19447 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ERCC3P19447 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.36□□□□□ -1.71
ERCC3P19447 AC006504.1-201ENST00000562493 3666 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 RNU6-525P-201ENST00000363685 104 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 RNU6-1141P-201ENST00000364520 107 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 SNORD32A-201ENST00000364805 84 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERCC3P19447 RNU6-1286P-201ENST00000383871 107 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.35□□□□□ -1.71
ERCC3P19447 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.35□□□□□ -1.71
ERCC3P19447 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.35□□□□□ -1.71
ERCC3P19447 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERCC3P19447 AP000907.1-201ENST00000428428 510 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC011742.1-201ENST00000431448 434 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC009296.1-201ENST00000443146 155 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 snoU13.30-201ENST00000458951 104 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 RPL23AP75-201ENST00000491601 451 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC074250.1-201ENST00000511117 192 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 CKS1BP7-201ENST00000522230 235 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.35□□□□□ -1.71
ERCC3P19447 MIR5701-3-201ENST00000578890 82 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 MIR5701-1-201ENST00000585138 82 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC006557.5-201ENST00000603126 811 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AL356157.2-201ENST00000605122 111 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 SNORD58B-201ENST00000607313 66 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC096772.1-201ENST00000609146 564 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC099778.2-201ENST00000610904 211 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 MIR5701-2-201ENST00000615634 82 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AL138825.1-201ENST00000618587 192 ntBASIC4.35□□□□□ -1.71
ERCC3P19447 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ERCC3P19447 AC244205.2-202ENST00000635781 342 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms