Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.71□□□□□ -1.82
ATF4P18848 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.71□□□□□ -1.82
ATF4P18848 ISCUP1-201ENST00000454451 448 ntBASIC3.71□□□□□ -1.82
ATF4P18848 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.71□□□□□ -1.82
ATF4P18848 AL049830.2-201ENST00000480072 201 ntBASIC3.71□□□□□ -1.82
ATF4P18848 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.71□□□□□ -1.82
ATF4P18848 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.71□□□□□ -1.82
ATF4P18848 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.71□□□□□ -1.82
ATF4P18848 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.71□□□□□ -1.82
ATF4P18848 RNU6-1012P-201ENST00000516606 109 ntBASIC3.71□□□□□ -1.82
ATF4P18848 RN7SKP49-201ENST00000516675 260 ntBASIC3.71□□□□□ -1.82
ATF4P18848 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.71□□□□□ -1.82
ATF4P18848 AC008033.2-201ENST00000542626 177 ntBASIC3.71□□□□□ -1.82
ATF4P18848 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ATF4P18848 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
ATF4P18848 PCGEM1.1-201ENST00000613431 131 ntBASIC3.71□□□□□ -1.82
ATF4P18848 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ATF4P18848 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ATF4P18848 ZNF204P-201ENST00000416749 2397 ntBASIC3.71□□□□□ -1.82
ATF4P18848 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.82
ATF4P18848 BX322639.1-202ENST00000423987 2213 ntBASIC3.71□□□□□ -1.82
ATF4P18848 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATF4P18848 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ATF4P18848 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.71□□□□□ -1.82
ATF4P18848 AC069528.2-201ENST00000624849 1991 ntBASIC3.71□□□□□ -1.82
ATF4P18848 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATF4P18848 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.7□□□□□ -1.82
ATF4P18848 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
ATF4P18848 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
ATF4P18848 Y_RNA.19-201ENST00000362462 99 ntBASIC3.7□□□□□ -1.82
ATF4P18848 U3.9-201ENST00000363823 204 ntBASIC3.7□□□□□ -1.82
ATF4P18848 RNU6-245P-201ENST00000384020 107 ntBASIC3.7□□□□□ -1.82
ATF4P18848 RNA5SP213-201ENST00000391031 106 ntBASIC3.7□□□□□ -1.82
ATF4P18848 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATF4P18848 HLFP1-201ENST00000402375 499 ntBASIC3.7□□□□□ -1.82
ATF4P18848 COX6B1P1-201ENST00000415962 213 ntBASIC3.7□□□□□ -1.82
ATF4P18848 ELOCP20-201ENST00000422460 345 ntBASIC3.7□□□□□ -1.82
ATF4P18848 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.7□□□□□ -1.82
ATF4P18848 AC112220.1-201ENST00000434628 355 ntBASIC3.7□□□□□ -1.82
ATF4P18848 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.7□□□□□ -1.82
ATF4P18848 RPL23AP70-201ENST00000483361 460 ntBASIC3.7□□□□□ -1.82
ATF4P18848 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.7□□□□□ -1.82
ATF4P18848 RNA5SP446-201ENST00000515955 82 ntBASIC3.7□□□□□ -1.82
ATF4P18848 SNORA25.14-201ENST00000516481 132 ntBASIC3.7□□□□□ -1.82
ATF4P18848 RNA5SP43-201ENST00000516559 110 ntBASIC3.7□□□□□ -1.82
ATF4P18848 IGHV3-76-201ENST00000522465 295 ntBASIC3.7□□□□□ -1.82
ATF4P18848 AC136624.4-201ENST00000573044 370 ntBASIC3.7□□□□□ -1.82
ATF4P18848 MIR4659A-201ENST00000580269 81 ntBASIC3.7□□□□□ -1.82
ATF4P18848 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.7□□□□□ -1.82
ATF4P18848 RPL30P11-203ENST00000598995 310 ntBASIC3.7□□□□□ -1.82
ATF4P18848 AC010999.1-201ENST00000611856 324 ntBASIC3.7□□□□□ -1.82
ATF4P18848 AC240442.1-201ENST00000616055 283 ntBASIC3.7□□□□□ -1.82
ATF4P18848 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATF4P18848 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATF4P18848 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATF4P18848 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
ATF4P18848 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.7□□□□□ -1.82
ATF4P18848 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ATF4P18848 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.69□□□□□ -1.82
ATF4P18848 AC010329.5-201ENST00000623497 2174 ntBASIC3.69□□□□□ -1.82
ATF4P18848 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATF4P18848 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.69□□□□□ -1.82
ATF4P18848 snoU2_19.1-201ENST00000362361 80 ntBASIC3.69□□□□□ -1.82
ATF4P18848 RNU4-15P-201ENST00000362613 141 ntBASIC3.69□□□□□ -1.82
ATF4P18848 RNU6-873P-201ENST00000363833 107 ntBASIC3.69□□□□□ -1.82
ATF4P18848 Y_RNA.193-201ENST00000363979 102 ntBASIC3.69□□□□□ -1.82
ATF4P18848 RNU6-378P-201ENST00000384324 107 ntBASIC3.69□□□□□ -1.82
ATF4P18848 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ATF4P18848 SNORD12B-201ENST00000410433 91 ntBASIC3.69□□□□□ -1.82
ATF4P18848 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.69□□□□□ -1.82
ATF4P18848 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
ATF4P18848 RPL23AP56-201ENST00000460778 453 ntBASIC3.69□□□□□ -1.82
ATF4P18848 AC145146.1-201ENST00000496370 254 ntBASIC3.69□□□□□ -1.82
ATF4P18848 MTND4LP22-201ENST00000508209 276 ntBASIC3.69□□□□□ -1.82
ATF4P18848 AC017037.1-201ENST00000508460 471 ntBASIC3.69□□□□□ -1.82
ATF4P18848 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.69□□□□□ -1.82
ATF4P18848 EIF4A1P12-201ENST00000551910 141 ntBASIC3.69□□□□□ -1.82
ATF4P18848 MIR4436B2-201ENST00000581415 91 ntBASIC3.69□□□□□ -1.82
ATF4P18848 MIR4480-201ENST00000582492 71 ntBASIC3.69□□□□□ -1.82
ATF4P18848 MIR4436B1-201ENST00000583272 91 ntBASIC3.69□□□□□ -1.82
ATF4P18848 MIR4737-201ENST00000583979 81 ntBASIC3.69□□□□□ -1.82
ATF4P18848 AC125232.2-201ENST00000592457 143 ntBASIC3.69□□□□□ -1.82
ATF4P18848 FAM25E-202ENST00000608562 189 ntBASIC3.69□□□□□ -1.82
ATF4P18848 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATF4P18848 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.69□□□□□ -1.82
ATF4P18848 MIR7515-201ENST00000637837 67 ntBASIC3.69□□□□□ -1.82
ATF4P18848 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATF4P18848 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.69□□□□□ -1.82
ATF4P18848 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF4P18848 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF4P18848 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF4P18848 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ATF4P18848 AC058791.1-201ENST00000608412 3198 ntBASIC3.68□□□□□ -1.82
ATF4P18848 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF4P18848 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
ATF4P18848 RNU6-26P-201ENST00000383985 107 ntBASIC3.68□□□□□ -1.82
ATF4P18848 RNU6-318P-201ENST00000384283 103 ntBASIC3.68□□□□□ -1.82
ATF4P18848 RNU1-44P-201ENST00000384453 163 ntBASIC3.68□□□□□ -1.82
ATF4P18848 MRPL35P1-201ENST00000404272 572 ntBASIC3.68□□□□□ -1.82
ATF4P18848 RNA5SP201-201ENST00000410316 124 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms