Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5SP317-201ENST00000410176 116 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RNU6-628P-201ENST00000410675 107 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RNA5SP311-201ENST00000411290 116 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RAB9AP3-201ENST00000412737 573 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 AL356968.1-201ENST00000416622 474 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.7□□□□□ -1.82
COL6A2P12110 AL358453.1-201ENST00000422522 250 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.7□□□□□ -1.82
COL6A2P12110 AP000907.1-201ENST00000428428 510 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.7□□□□□ -1.82
COL6A2P12110 CYCSP32-201ENST00000440548 321 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RPEP5-201ENST00000441137 268 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 AL031659.1-201ENST00000447075 539 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RAB9AP1-201ENST00000449393 573 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.7□□□□□ -1.82
COL6A2P12110 SNORD127-201ENST00000458892 86 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 snoU13.30-201ENST00000458951 104 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 AC097462.2-201ENST00000504623 481 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RNA5SP315-201ENST00000516340 116 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RNA5SP312-201ENST00000517068 116 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 AC024581.2-201ENST00000619986 252 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 SCARNA4-201ENST00000629045 128 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 U6.104-201ENST00000637979 90 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL6A2P12110 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
COL6A2P12110 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL6A2P12110 AC233981.2-201ENST00000611524 1614 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL6A2P12110 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 Y_RNA.19-201ENST00000362462 99 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 Y_RNA.376-201ENST00000365638 108 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 Y_RNA.461-201ENST00000384263 103 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 MT-TW-201ENST00000387382 68 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RPL21P75-201ENST00000396599 483 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RPL21P28-201ENST00000401418 483 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RPL21P65-201ENST00000406094 466 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 SNORA3.3-201ENST00000408712 125 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RNU6-1245P-201ENST00000411130 106 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RN7SKP53-201ENST00000411337 315 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC074117.2-201ENST00000417130 397 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 EIF1AXP1-201ENST00000419267 435 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AL590556.1-201ENST00000423231 483 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.69□□□□□ -1.82
COL6A2P12110 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.69□□□□□ -1.82
COL6A2P12110 AC007389.2-201ENST00000434630 306 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.69□□□□□ -1.82
COL6A2P12110 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.69□□□□□ -1.82
COL6A2P12110 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.69□□□□□ -1.82
COL6A2P12110 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.69□□□□□ -1.82
COL6A2P12110 RPL21P39-201ENST00000463605 483 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC034236.1-201ENST00000469891 373 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC087190.1-201ENST00000484462 480 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC107032.1-201ENST00000485945 480 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC132942.1-201ENST00000486753 483 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC093591.1-201ENST00000491435 481 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RPL23AP75-201ENST00000491601 451 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC104564.1-201ENST00000493028 407 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RPL21P16-201ENST00000495531 483 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 ANXA2P1-201ENST00000505539 926 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AP002770.2-201ENST00000543613 532 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.69□□□□□ -1.82
COL6A2P12110 AC016256.1-201ENST00000547971 354 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.69□□□□□ -1.82
COL6A2P12110 MIR4738-201ENST00000579134 87 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AL451007.1-201ENST00000595491 289 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 RPL23AP88-201ENST00000605759 454 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 SNORA51-201ENST00000606420 132 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 AC130454.1-201ENST00000622948 401 ntBASIC3.69□□□□□ -1.82
COL6A2P12110 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.69□□□□□ -1.82
COL6A2P12110 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL6A2P12110 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL6A2P12110 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL6A2P12110 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
COL6A2P12110 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL6A2P12110 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.68□□□□□ -1.82
COL6A2P12110 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 Y_RNA.64-201ENST00000362845 102 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 SNORD32A-201ENST00000364805 84 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 Y_RNA.358-201ENST00000365491 99 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 RNU6-1286P-201ENST00000383871 107 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 RNU6-213P-201ENST00000384051 104 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 Y_RNA.458-201ENST00000384240 102 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 RNU1-13P-201ENST00000384499 162 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 SNORA1.3-201ENST00000384676 136 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 MIR134-201ENST00000385258 73 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 SNORA57.3-201ENST00000411095 141 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms