Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNORA4.3-201ENST00000365564 137 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 RNU6-395P-201ENST00000365662 106 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL359704.1-201ENST00000411586 781 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.64□□□□□ -2.31
CXCL1P09341 AC009518.2-201ENST00000418056 731 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 RPS15AP12-201ENST00000419498 388 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL365338.1-201ENST00000422282 858 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.64□□□□□ -2.31
CXCL1P09341 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.64□□□□□ -2.31
CXCL1P09341 AC010095.1-201ENST00000443543 144 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.64□□□□□ -2.31
CXCL1P09341 ZNF886P-201ENST00000450781 723 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 RPS27AP8-201ENST00000452665 445 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.64□□□□□ -2.31
CXCL1P09341 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.64□□□□□ -2.31
CXCL1P09341 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.64□□□□□ -2.31
CXCL1P09341 RNU6-351P-201ENST00000516097 100 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 DEFB108A-201ENST00000530110 222 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.64□□□□□ -2.31
CXCL1P09341 AC087897.1-201ENST00000550134 156 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL132657.2-201ENST00000564417 358 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL512347.1-201ENST00000566420 503 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.64□□□□□ -2.31
CXCL1P09341 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.64□□□□□ -2.31
CXCL1P09341 MZT1P2-201ENST00000604387 248 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL022345.2-201ENST00000606307 135 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 AL365204.3-201ENST00000612448 685 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CXCL1P09341 snoU2_19.1-201ENST00000362361 80 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 RNU6-212P-201ENST00000362642 104 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 RNU6-72P-201ENST00000384285 79 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 SNORA17.3-201ENST00000391159 129 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 MTCO1P17-201ENST00000411522 491 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL1P09341 SNX2P2-201ENST00000424553 323 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.63□□□□□ -2.31
CXCL1P09341 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL1P09341 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL1P09341 RSL24D1P8-201ENST00000434442 492 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AL163195.1-201ENST00000496941 348 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AC097473.1-201ENST00000508142 408 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AC009646.1-201ENST00000510455 318 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL1P09341 RNU6-914P-201ENST00000516749 109 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 SNORD60.2-201ENST00000516883 86 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 CYCSP23-201ENST00000519781 313 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.63□□□□□ -2.31
CXCL1P09341 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL1P09341 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.63□□□□□ -2.31
CXCL1P09341 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.63□□□□□ -2.31
CXCL1P09341 FAM71BP1-201ENST00000604431 523 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 BX284668.6-201ENST00000606899 438 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 AC120349.3-201ENST00000624377 529 ntBASIC0.63□□□□□ -2.31
CXCL1P09341 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CXCL1P09341 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
CXCL1P09341 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
CXCL1P09341 MIR194-1-201ENST00000384892 85 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 RNU6-278P-201ENST00000390945 109 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.62□□□□□ -2.31
CXCL1P09341 AC013262.1-201ENST00000426710 252 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 AC245047.4-201ENST00000433189 144 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.62□□□□□ -2.31
CXCL1P09341 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.62□□□□□ -2.31
CXCL1P09341 MTND1P30-201ENST00000441241 901 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 RNA5SP269-201ENST00000459032 137 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 MTND1P3-201ENST00000484956 952 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.62□□□□□ -2.31
CXCL1P09341 AC027338.1-201ENST00000514840 825 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.62□□□□□ -2.31
CXCL1P09341 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.62□□□□□ -2.31
CXCL1P09341 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CXCL1P09341 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.62□□□□□ -2.31
CXCL1P09341 AC009977.1-201ENST00000586015 570 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 BNIP3P31-201ENST00000604515 566 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 AC211469.2-201ENST00000605461 205 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 AC008945.2-201ENST00000606056 604 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
CXCL1P09341 RNU5A-8P-201ENST00000364102 114 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 RNU6-777P-201ENST00000364265 104 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 MIR548B-201ENST00000385247 97 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 RNA5SP213-201ENST00000391031 106 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.61□□□□□ -2.31
CXCL1P09341 MIR1261-201ENST00000408659 82 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AC006461.1-201ENST00000412637 326 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AC004965.1-201ENST00000413033 213 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.61□□□□□ -2.31
CXCL1P09341 UBE2D3P3-201ENST00000426992 425 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AL591806.2-201ENST00000433122 173 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AL121890.1-201ENST00000435457 205 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 LARP1BP3-201ENST00000437229 869 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 AC132479.1-201ENST00000449160 144 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 NDUFB1P2-201ENST00000449477 176 ntBASIC0.61□□□□□ -2.31
CXCL1P09341 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms