Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.36□□□□□ -2.03
VIMP08670 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.36□□□□□ -2.03
VIMP08670 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.36□□□□□ -2.03
VIMP08670 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VIMP08670 AL161788.1-201ENST00000441805 169 ntBASIC2.36□□□□□ -2.03
VIMP08670 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.36□□□□□ -2.03
VIMP08670 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.36□□□□□ -2.03
VIMP08670 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.36□□□□□ -2.03
VIMP08670 RPL30P12-201ENST00000474666 353 ntBASIC2.36□□□□□ -2.03
VIMP08670 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
VIMP08670 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.36□□□□□ -2.03
VIMP08670 MTND2P33-201ENST00000506452 1031 ntBASIC2.36□□□□□ -2.03
VIMP08670 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.36□□□□□ -2.03
VIMP08670 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
VIMP08670 SNORA25.17-201ENST00000517184 124 ntBASIC2.36□□□□□ -2.03
VIMP08670 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VIMP08670 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.36□□□□□ -2.03
VIMP08670 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VIMP08670 AC023050.3-201ENST00000541142 333 ntBASIC2.36□□□□□ -2.03
VIMP08670 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.36□□□□□ -2.03
VIMP08670 AC093249.1-201ENST00000567049 203 ntBASIC2.36□□□□□ -2.03
VIMP08670 AL158209.2-201ENST00000619266 216 ntBASIC2.36□□□□□ -2.03
VIMP08670 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.36□□□□□ -2.03
VIMP08670 MIR6863-201ENST00000636112 90 ntBASIC2.36□□□□□ -2.03
VIMP08670 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VIMP08670 Y_RNA.255-201ENST00000364581 97 ntBASIC2.35□□□□□ -2.03
VIMP08670 RNA5SP240-201ENST00000365355 128 ntBASIC2.35□□□□□ -2.03
VIMP08670 Y_RNA.399-201ENST00000383955 105 ntBASIC2.35□□□□□ -2.03
VIMP08670 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
VIMP08670 AC016907.1-201ENST00000419483 435 ntBASIC2.35□□□□□ -2.03
VIMP08670 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.35□□□□□ -2.03
VIMP08670 AL591043.1-201ENST00000432461 424 ntBASIC2.35□□□□□ -2.03
VIMP08670 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
VIMP08670 AC007969.2-201ENST00000441891 191 ntBASIC2.35□□□□□ -2.03
VIMP08670 USP9YP8-201ENST00000441913 500 ntBASIC2.35□□□□□ -2.03
VIMP08670 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.35□□□□□ -2.03
VIMP08670 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.35□□□□□ -2.03
VIMP08670 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.35□□□□□ -2.03
VIMP08670 CYP2C59P-201ENST00000457790 269 ntBASIC2.35□□□□□ -2.03
VIMP08670 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
VIMP08670 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
VIMP08670 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.35□□□□□ -2.03
VIMP08670 SNORA40.12-201ENST00000516329 111 ntBASIC2.35□□□□□ -2.03
VIMP08670 AP003034.1-201ENST00000534621 422 ntBASIC2.35□□□□□ -2.03
VIMP08670 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.35□□□□□ -2.03
VIMP08670 AC104073.3-201ENST00000610942 955 ntBASIC2.35□□□□□ -2.03
VIMP08670 OR5AK4P-201ENST00000635912 903 ntBASIC2.35□□□□□ -2.03
VIMP08670 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VIMP08670 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VIMP08670 AL359851.1-201ENST00000569460 4997 ntBASIC2.34□□□□□ -2.03
VIMP08670 RNU6-212P-201ENST00000362642 104 ntBASIC2.34□□□□□ -2.03
VIMP08670 Y_RNA.194-201ENST00000363985 102 ntBASIC2.34□□□□□ -2.03
VIMP08670 RNU6-266P-201ENST00000364225 107 ntBASIC2.34□□□□□ -2.03
VIMP08670 SNORA44-201ENST00000384584 132 ntBASIC2.34□□□□□ -2.03
VIMP08670 MIR95-201ENST00000385072 81 ntBASIC2.34□□□□□ -2.03
VIMP08670 AL606923.1-201ENST00000406616 190 ntBASIC2.34□□□□□ -2.03
VIMP08670 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
VIMP08670 SNORD56-201ENST00000413522 71 ntBASIC2.34□□□□□ -2.03
VIMP08670 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.34□□□□□ -2.03
VIMP08670 AC016691.1-201ENST00000441321 413 ntBASIC2.34□□□□□ -2.03
VIMP08670 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.34□□□□□ -2.03
VIMP08670 AL135938.1-201ENST00000443141 297 ntBASIC2.34□□□□□ -2.03
VIMP08670 FDX1P2-201ENST00000450769 375 ntBASIC2.34□□□□□ -2.03
VIMP08670 AL122001.1-201ENST00000457027 370 ntBASIC2.34□□□□□ -2.03
VIMP08670 RNU7-167P-201ENST00000459160 62 ntBASIC2.34□□□□□ -2.03
VIMP08670 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.34□□□□□ -2.03
VIMP08670 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
VIMP08670 RNU6-377P-201ENST00000515965 102 ntBASIC2.34□□□□□ -2.03
VIMP08670 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.34□□□□□ -2.03
VIMP08670 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.34□□□□□ -2.03
VIMP08670 AP001330.5-201ENST00000607176 411 ntBASIC2.34□□□□□ -2.03
VIMP08670 AC097065.2-201ENST00000608159 533 ntBASIC2.34□□□□□ -2.03
VIMP08670 U2.17-201ENST00000611454 95 ntBASIC2.34□□□□□ -2.03
VIMP08670 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VIMP08670 AL442067.2-201ENST00000614033 363 ntBASIC2.34□□□□□ -2.03
VIMP08670 uc_338.34-201ENST00000617467 174 ntBASIC2.34□□□□□ -2.03
VIMP08670 U4atac.1-201ENST00000618345 95 ntBASIC2.34□□□□□ -2.03
VIMP08670 AC068792.1-201ENST00000621354 417 ntBASIC2.34□□□□□ -2.03
VIMP08670 AL160394.1-201ENST00000624765 724 ntBASIC2.34□□□□□ -2.03
VIMP08670 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.34□□□□□ -2.04
VIMP08670 RNU6-655P-201ENST00000362858 107 ntBASIC2.33□□□□□ -2.04
VIMP08670 RNU6-105P-201ENST00000363909 104 ntBASIC2.33□□□□□ -2.04
VIMP08670 RNU4-24P-201ENST00000364565 139 ntBASIC2.33□□□□□ -2.04
VIMP08670 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.33□□□□□ -2.04
VIMP08670 AL356379.1-201ENST00000414105 126 ntBASIC2.33□□□□□ -2.04
VIMP08670 AIMP1P2-201ENST00000425294 312 ntBASIC2.33□□□□□ -2.04
VIMP08670 RPL7P54-201ENST00000438336 674 ntBASIC2.33□□□□□ -2.04
VIMP08670 DNAJC19P4-201ENST00000440115 345 ntBASIC2.33□□□□□ -2.04
VIMP08670 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.33□□□□□ -2.04
VIMP08670 AL121594.1-201ENST00000475906 575 ntBASIC2.33□□□□□ -2.04
VIMP08670 AC011825.1-201ENST00000484967 388 ntBASIC2.33□□□□□ -2.04
VIMP08670 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.33□□□□□ -2.04
VIMP08670 CCDC34P1-201ENST00000507441 517 ntBASIC2.33□□□□□ -2.04
VIMP08670 AC105313.1-201ENST00000509121 353 ntBASIC2.33□□□□□ -2.04
VIMP08670 MTND4P7-201ENST00000523876 130 ntBASIC2.33□□□□□ -2.04
VIMP08670 AC104383.1-201ENST00000530297 370 ntBASIC2.33□□□□□ -2.04
VIMP08670 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.33□□□□□ -2.04
VIMP08670 AC022880.1-201ENST00000534017 973 ntBASIC2.33□□□□□ -2.04
VIMP08670 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.33□□□□□ -2.04
VIMP08670 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms