Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.14□□□□□ -2.39
SPTA1P02549 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.14□□□□□ -2.39
SPTA1P02549 AL590396.4-201ENST00000636779 956 ntBASIC0.14□□□□□ -2.39
SPTA1P02549 AC023934.1-201ENST00000574529 2389 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AL138713.1-201ENST00000624026 2130 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 MIR597-201ENST00000384968 97 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 TAF9BP2-201ENST00000400856 499 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 RNU2-47P-201ENST00000410649 186 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 RPS26P42-201ENST00000413485 326 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.13□□□□□ -2.39
SPTA1P02549 AC027119.1-201ENST00000440877 241 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AL353691.1-201ENST00000451332 387 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC025465.4-201ENST00000513422 638 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.13□□□□□ -2.39
SPTA1P02549 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.13□□□□□ -2.39
SPTA1P02549 AP001893.2-201ENST00000526949 202 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AL512310.8-201ENST00000550183 120 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 MIR5093-201ENST00000583199 100 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 SNORD39.3-201ENST00000584451 71 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC004987.4-201ENST00000603383 338 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC004805.2-201ENST00000605382 482 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC135803.1-201ENST00000608748 565 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 ENSAP3-201ENST00000312710 333 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 Y_RNA.413-201ENST00000384007 102 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 RNU6-441P-201ENST00000384545 106 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SPTA1P02549 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SPTA1P02549 SNORD89-201ENST00000390981 114 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 VPS26BP1-201ENST00000417155 755 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC114482.1-201ENST00000418010 247 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC104651.1-201ENST00000427559 735 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AL512844.2-201ENST00000433990 593 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.13□□□□□ -2.39
SPTA1P02549 MTND4LP10-201ENST00000435146 291 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 MTCO2P25-201ENST00000447065 681 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.13□□□□□ -2.39
SPTA1P02549 AC104073.1-201ENST00000451988 151 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.13□□□□□ -2.39
SPTA1P02549 Y_RNA.754-201ENST00000476024 102 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 ACA64.5-201ENST00000516207 127 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 RNA5SP437-201ENST00000517249 129 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.13□□□□□ -2.39
SPTA1P02549 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.13□□□□□ -2.39
SPTA1P02549 AL442163.3-201ENST00000554110 156 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.13□□□□□ -2.39
SPTA1P02549 Y_RNA.790-201ENST00000614282 102 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 Y_RNA.782-201ENST00000614695 102 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AL158163.2-201ENST00000619110 700 ntBASIC0.13□□□□□ -2.39
SPTA1P02549 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.12□□□□□ -2.39
SPTA1P02549 RNA5SP327-201ENST00000362494 101 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 MIR888-201ENST00000401186 77 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AC127391.1-201ENST00000411737 98 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.12□□□□□ -2.39
SPTA1P02549 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC093249.1-201ENST00000567049 203 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AL583856.2-201ENST00000606298 543 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RNU6-654P-201ENST00000364373 107 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RNU6-945P-201ENST00000383947 107 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RNU6-1237P-201ENST00000384777 107 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AC119751.3-201ENST00000399720 670 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RPL36AP53-201ENST00000432891 316 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTA1P02549 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SPTA1P02549 AC074198.2-201ENST00000508153 258 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RNA5SP290-201ENST00000517133 127 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SPTA1P02549 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC079598.5-201ENST00000547460 117 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC008088.1-201ENST00000580993 280 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTA1P02549 AC242628.1-201ENST00000606810 391 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AL132822.1-201ENST00000617063 513 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 AL159972.1-201ENST00000625150 448 ntBASIC0.12□□□□□ -2.39
SPTA1P02549 RNU5A-1-201ENST00000362698 116 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 SNORA32.3-201ENST00000384772 121 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 MIR1290-201ENST00000408735 78 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 RN7SKP142-201ENST00000411236 328 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.11□□□□□ -2.39
SPTA1P02549 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.11□□□□□ -2.39
SPTA1P02549 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.11□□□□□ -2.39
SPTA1P02549 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
SPTA1P02549 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.11□□□□□ -2.39
SPTA1P02549 AL050341.1-201ENST00000447743 313 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 RPL31P3-201ENST00000458430 332 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 RPL30P7-201ENST00000479312 323 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.11□□□□□ -2.39
SPTA1P02549 PTP4A1P4-201ENST00000512479 322 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 Y_RNA.659-201ENST00000515994 113 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.11□□□□□ -2.39
SPTA1P02549 AC124293.1-201ENST00000530034 493 ntBASIC0.11□□□□□ -2.39
SPTA1P02549 RNY1P9-201ENST00000532431 109 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 419.4 ms