Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK1BO75841 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK1BO75841 MTCO3P46-201ENST00000425787 232 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 VN1R108P-201ENST00000431580 830 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK1BO75841 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK1BO75841 AC003989.2-201ENST00000440224 169 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 AC007969.2-201ENST00000441891 191 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK1BO75841 RPL23AP63-201ENST00000498752 471 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 MIR449C-201ENST00000516047 92 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 Y_RNA.672-201ENST00000516289 104 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 RNVU1-2-201ENST00000516326 135 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 SCARNA1-201ENST00000517138 166 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK1BO75841 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK1BO75841 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK1BO75841 MIR5692A1-201ENST00000580523 69 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 MIR3162-201ENST00000581818 82 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 AC005771.1-201ENST00000585581 349 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 WISP1-OT1-201ENST00000602893 642 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 U1.36-201ENST00000620684 176 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK1BO75841 AC243829.7-201ENST00000633081 225 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
UPK1BO75841 AC002543.1-201ENST00000299783 1954 ntBASIC1.37□□□□□ -2.19
UPK1BO75841 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
UPK1BO75841 RNU6-527P-201ENST00000363425 104 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
UPK1BO75841 RAP1BP3-201ENST00000407180 549 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.36□□□□□ -2.19
UPK1BO75841 AC009310.1-201ENST00000414414 451 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AC007098.1-201ENST00000420122 367 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 MTATP6P16-201ENST00000434543 526 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.36□□□□□ -2.19
UPK1BO75841 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.36□□□□□ -2.19
UPK1BO75841 Z73417.1-201ENST00000447373 778 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 HMGN2P23-201ENST00000456759 269 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 RAP1BP2-201ENST00000478270 544 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 MTCYBP35-201ENST00000503630 1137 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 MTND2P33-201ENST00000506452 1031 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 SCARNA24.1-201ENST00000516465 137 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.36□□□□□ -2.19
UPK1BO75841 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1BO75841 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1BO75841 RPL21P5-201ENST00000554662 472 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.36□□□□□ -2.19
UPK1BO75841 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1BO75841 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.36□□□□□ -2.19
UPK1BO75841 AC091135.1-201ENST00000585943 307 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AC245884.10-201ENST00000597355 337 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AC025754.2-201ENST00000606491 432 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AL451064.1-201ENST00000607718 471 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AC104073.3-201ENST00000610942 955 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 AC009159.2-201ENST00000617603 606 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.36□□□□□ -2.19
UPK1BO75841 AL136360.1-201ENST00000503377 1900 ntBASIC1.36□□□□□ -2.19
UPK1BO75841 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UPK1BO75841 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UPK1BO75841 Y_RNA.99-201ENST00000363138 105 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 RNU6-179P-201ENST00000363350 107 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 RNU5E-7P-201ENST00000365290 117 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 SNORA20.2-201ENST00000383922 131 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 RNU6-116P-201ENST00000384042 109 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 Y_RNA.576-201ENST00000384781 102 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
UPK1BO75841 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1BO75841 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1BO75841 AL591043.1-201ENST00000432461 424 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1BO75841 AC104850.1-201ENST00000435940 476 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 UBE2D3P4-201ENST00000441973 436 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.35□□□□□ -2.19
UPK1BO75841 MTND2P14-201ENST00000482139 351 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 RNU5F-2P-201ENST00000516066 82 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 MTND2P32-201ENST00000521584 1038 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 AC022878.1-201ENST00000530684 149 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.35□□□□□ -2.19
UPK1BO75841 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.35□□□□□ -2.19
UPK1BO75841 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK1BO75841 AL136363.2-201ENST00000604173 851 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 AC016925.2-201ENST00000605108 242 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 MIR7844-201ENST00000616161 122 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 AC091304.6-201ENST00000619761 202 ntBASIC1.35□□□□□ -2.19
UPK1BO75841 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.34□□□□□ -2.19
UPK1BO75841 RNU6-23P-201ENST00000363283 107 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNY1P12-201ENST00000364251 105 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNU6-439P-201ENST00000384188 106 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
UPK1BO75841 SNORA12-201ENST00000391162 147 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNU2-3P-201ENST00000410144 191 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 RNU4-53P-201ENST00000410828 140 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 CYCSP33-201ENST00000414485 327 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
UPK1BO75841 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
UPK1BO75841 SNORD11.1-201ENST00000459482 85 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms