Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL162424.1-201ENST00000602325 221 ntBASIC4.17□□□□□ -1.74
CPNE3O75131 MIR6891-201ENST00000618788 93 ntBASIC4.17□□□□□ -1.74
CPNE3O75131 IGHVIII-44-202ENST00000636235 289 ntBASIC4.17□□□□□ -1.74
CPNE3O75131 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CPNE3O75131 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CPNE3O75131 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CPNE3O75131 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.16□□□□□ -1.74
CPNE3O75131 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CPNE3O75131 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CPNE3O75131 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CPNE3O75131 ZNF204P-201ENST00000416749 2397 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 SNORD74.4-201ENST00000364129 80 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 RNU6-740P-201ENST00000364734 105 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 RNU6-886P-201ENST00000384319 105 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 RNU6-19P-201ENST00000384718 107 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 MIR513A2-201ENST00000385249 127 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AL591419.1-201ENST00000427423 339 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 SETP5-201ENST00000437270 562 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.16□□□□□ -1.74
CPNE3O75131 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.16□□□□□ -1.74
CPNE3O75131 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
CPNE3O75131 AC108022.1-201ENST00000493466 478 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 SNORA25.14-201ENST00000516481 132 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AC024405.2-202ENST00000532731 184 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AC105137.2-201ENST00000569073 466 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AL357075.2-201ENST00000614906 189 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.16□□□□□ -1.74
CPNE3O75131 AC006001.4-201ENST00000622243 395 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 AC091905.2-201ENST00000623143 306 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 SNORD98-201ENST00000636377 67 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.16□□□□□ -1.74
CPNE3O75131 AC135776.4-201ENST00000624300 1904 ntBASIC4.16□□□□□ -1.74
CPNE3O75131 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.16□□□□□ -1.74
CPNE3O75131 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CPNE3O75131 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.16□□□□□ -1.74
CPNE3O75131 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CPNE3O75131 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CPNE3O75131 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CPNE3O75131 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CPNE3O75131 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CPNE3O75131 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.15□□□□□ -1.74
CPNE3O75131 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.74
CPNE3O75131 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CPNE3O75131 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.15□□□□□ -1.74
CPNE3O75131 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CPNE3O75131 RNU4-56P-201ENST00000364700 142 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 RNU1-63P-201ENST00000383902 164 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 RNA5SP39-201ENST00000411245 120 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.15□□□□□ -1.75
CPNE3O75131 RPL23AP52-201ENST00000439311 478 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CPNE3O75131 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CPNE3O75131 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.15□□□□□ -1.75
CPNE3O75131 Y_RNA.683-201ENST00000516508 93 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 RNA5SP309-201ENST00000516670 106 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 SNORD19.2-201ENST00000516978 73 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 AP000867.2-201ENST00000532468 320 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 CBX3P4-201ENST00000538909 354 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.15□□□□□ -1.75
CPNE3O75131 MIR3136-201ENST00000583498 78 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.15□□□□□ -1.75
CPNE3O75131 AL512605.2-201ENST00000592972 256 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 ZYXP1-201ENST00000617638 118 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 AC008785.1-201ENST00000624475 456 ntBASIC4.15□□□□□ -1.75
CPNE3O75131 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CPNE3O75131 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CPNE3O75131 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.14□□□□□ -1.75
CPNE3O75131 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
CPNE3O75131 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
CPNE3O75131 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE3O75131 Y_RNA.179-201ENST00000363844 90 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 Y_RNA.331-201ENST00000365267 102 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 RNU1-64P-201ENST00000365443 163 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AL133475.1-201ENST00000404414 305 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 RPL23AP48-201ENST00000406913 488 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 RPL23AP36-201ENST00000413895 458 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.14□□□□□ -1.75
CPNE3O75131 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.14□□□□□ -1.75
CPNE3O75131 POLR2KP2-201ENST00000438155 177 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AL714022.1-201ENST00000439897 151 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AC010099.1-201ENST00000455434 375 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.14□□□□□ -1.75
CPNE3O75131 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.14□□□□□ -1.75
CPNE3O75131 TRAV8-5-201ENST00000537369 341 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AP002392.1-201ENST00000537692 208 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 CYP4A27P-201ENST00000567218 190 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.14□□□□□ -1.75
CPNE3O75131 KLKP1-201ENST00000595979 403 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AC091152.3-201ENST00000604227 325 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 AC007496.3-201ENST00000624987 3443 ntBASIC4.14□□□□□ -1.75
CPNE3O75131 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.14□□□□□ -1.75
CPNE3O75131 AL133383.2-201ENST00000622958 2336 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms