Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RPS29P26-201ENST00000477483 171 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AC015911.1-201ENST00000495111 156 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AC009901.1-201ENST00000506703 541 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AC096745.1-201ENST00000509945 370 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AC104136.1-201ENST00000512969 394 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.05□□□□□ -1.92
SMAD6O43541 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 SCARNA16.2-201ENST00000516520 172 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.05□□□□□ -1.92
SMAD6O43541 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.05□□□□□ -1.92
SMAD6O43541 AL161670.1-201ENST00000554348 137 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.05□□□□□ -1.92
SMAD6O43541 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.05□□□□□ -1.92
SMAD6O43541 AC012119.1-201ENST00000603184 222 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AC104695.3-201ENST00000604052 296 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMAD6O43541 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.05□□□□□ -1.92
SMAD6O43541 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
SMAD6O43541 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.04□□□□□ -1.92
SMAD6O43541 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.04□□□□□ -1.92
SMAD6O43541 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 AC138393.1-203ENST00000327086 343 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 RNU6-490P-201ENST00000362985 107 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 Y_RNA.153-201ENST00000363615 91 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 Y_RNA.176-201ENST00000363815 109 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 RNU6-702P-201ENST00000364982 107 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 RNU1-140P-201ENST00000365040 165 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 SET-203ENST00000372688 801 ntTSL 2 BASIC3.04□□□□□ -1.92
SMAD6O43541 Y_RNA.455-201ENST00000384230 98 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 MIR493-201ENST00000385254 89 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 Y_RNA.645-201ENST00000391229 102 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.04□□□□□ -1.92
SMAD6O43541 SNORD5.1-201ENST00000458800 75 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.04□□□□□ -1.92
SMAD6O43541 AC022493.2-201ENST00000506122 481 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 GMPSP1-201ENST00000514075 579 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 RNU6-794P-201ENST00000517261 64 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AC087854.1-201ENST00000519706 414 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.04□□□□□ -1.92
SMAD6O43541 AC023442.1-201ENST00000531247 422 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.04□□□□□ -1.92
SMAD6O43541 H3F3AP1-201ENST00000559984 334 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AC113195.1-201ENST00000579952 141 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 MIR4506-201ENST00000584693 77 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SMAD6O43541 AC011494.1-201ENST00000596454 237 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 RPL23AP78-201ENST00000599928 470 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AC002044.1-201ENST00000606707 158 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AL161423.1-201ENST00000613700 262 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 AC007792.1-201ENST00000623023 402 ntBASIC3.04□□□□□ -1.92
SMAD6O43541 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.04□□□□□ -1.92
SMAD6O43541 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SMAD6O43541 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMAD6O43541 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMAD6O43541 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMAD6O43541 Y_RNA.80-201ENST00000362996 102 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 RNU6-266P-201ENST00000364225 107 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 RNU6-214P-201ENST00000384130 107 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 RNU6-1222P-201ENST00000384615 107 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 Y_RNA.618-201ENST00000410949 107 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.03□□□□□ -1.92
SMAD6O43541 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC243428.1-201ENST00000421099 264 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 USMG5P1-201ENST00000425964 177 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AL591212.2-201ENST00000433923 257 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 Z96811.1-201ENST00000445880 108 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC092436.3-201ENST00000511788 257 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 RNU6-635P-201ENST00000516651 102 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 RN7SKP258-201ENST00000517151 304 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMAD6O43541 EIF4BP1-201ENST00000554881 351 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.03□□□□□ -1.92
SMAD6O43541 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.03□□□□□ -1.92
SMAD6O43541 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC018889.1-201ENST00000605372 397 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC093732.2-201ENST00000607950 274 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.03□□□□□ -1.92
SMAD6O43541 SDR42E1P2-201ENST00000614861 481 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC002064.3-201ENST00000623448 346 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AC099654.7-201ENST00000635788 2127 ntBASIC3.03□□□□□ -1.92
SMAD6O43541 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.03□□□□□ -1.92
SMAD6O43541 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
SMAD6O43541 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMAD6O43541 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SMAD6O43541 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMAD6O43541 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMAD6O43541 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SMAD6O43541 AC005592.1-201ENST00000566527 1640 ntBASIC3.02□□□□□ -1.93
SMAD6O43541 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
SMAD6O43541 Y_RNA.2-201ENST00000362330 96 ntBASIC3.02□□□□□ -1.93
SMAD6O43541 U3.6-201ENST00000363622 211 ntBASIC3.02□□□□□ -1.93
SMAD6O43541 Y_RNA.188-201ENST00000363952 111 ntBASIC3.02□□□□□ -1.93
SMAD6O43541 Y_RNA.428-201ENST00000384078 102 ntBASIC3.02□□□□□ -1.93
SMAD6O43541 RNU6-784P-201ENST00000384330 106 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms