Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC078899.3-201ENST00000599065 212 ntBASIC3.02□□□□□ -1.93
MSI1O43347 AC008121.1-201ENST00000603244 268 ntBASIC3.02□□□□□ -1.93
MSI1O43347 AL627309.6-201ENST00000606857 840 ntBASIC3.02□□□□□ -1.93
MSI1O43347 AC004832.5-201ENST00000608677 401 ntBASIC3.02□□□□□ -1.93
MSI1O43347 AL161629.2-201ENST00000615347 275 ntBASIC3.02□□□□□ -1.93
MSI1O43347 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
MSI1O43347 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MSI1O43347 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MSI1O43347 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MSI1O43347 GABRG2-229ENST00000641017 3628 ntBASIC3.01□□□□□ -1.93
MSI1O43347 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
MSI1O43347 RNA5SP295-201ENST00000362655 121 ntBASIC3.01□□□□□ -1.93
MSI1O43347 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
MSI1O43347 Y_RNA.460-201ENST00000384255 102 ntBASIC3.01□□□□□ -1.93
MSI1O43347 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
MSI1O43347 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
MSI1O43347 RNU6-370P-201ENST00000411008 104 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL117339.3-201ENST00000418733 162 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AF228730.4-201ENST00000421457 183 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.01□□□□□ -1.93
MSI1O43347 HIGD1AP11-201ENST00000438361 280 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL714022.1-201ENST00000439897 151 ntBASIC3.01□□□□□ -1.93
MSI1O43347 RPL26P9-201ENST00000457466 433 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AC096576.1-201ENST00000489014 359 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AC083906.5-201ENST00000503722 328 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
MSI1O43347 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.01□□□□□ -1.93
MSI1O43347 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.01□□□□□ -1.93
MSI1O43347 APOOP3-201ENST00000536787 586 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.01□□□□□ -1.93
MSI1O43347 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.01□□□□□ -1.93
MSI1O43347 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.01□□□□□ -1.93
MSI1O43347 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.01□□□□□ -1.93
MSI1O43347 HMGN2P15-201ENST00000585707 270 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AC044792.1-201ENST00000593294 196 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL121917.1-203ENST00000605534 577 ntBASIC3.01□□□□□ -1.93
MSI1O43347 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MSI1O43347 MIR6128-201ENST00000615528 109 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL138880.2-201ENST00000616214 239 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AC010378.1-201ENST00000619270 362 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AL160413.1-201ENST00000622780 310 ntBASIC3.01□□□□□ -1.93
MSI1O43347 AC090574.1-201ENST00000623186 233 ntBASIC3.01□□□□□ -1.93
MSI1O43347 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MSI1O43347 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.01□□□□□ -1.93
MSI1O43347 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MSI1O43347 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MSI1O43347 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
MSI1O43347 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3□□□□□ -1.93
MSI1O43347 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MSI1O43347 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3□□□□□ -1.93
MSI1O43347 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MSI1O43347 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
MSI1O43347 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3□□□□□ -1.93
MSI1O43347 Y_RNA.259-201ENST00000364619 101 ntBASIC3□□□□□ -1.93
MSI1O43347 RNU6-306P-201ENST00000384617 107 ntBASIC3□□□□□ -1.93
MSI1O43347 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3□□□□□ -1.93
MSI1O43347 ATG3P1-201ENST00000419507 911 ntBASIC3□□□□□ -1.93
MSI1O43347 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
MSI1O43347 BPY2DP-201ENST00000422208 265 ntBASIC3□□□□□ -1.93
MSI1O43347 AL645568.3-201ENST00000433683 316 ntBASIC3□□□□□ -1.93
MSI1O43347 AC107083.1-201ENST00000439643 279 ntBASIC3□□□□□ -1.93
MSI1O43347 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
MSI1O43347 AL031274.1-201ENST00000450334 232 ntBASIC3□□□□□ -1.93
MSI1O43347 NIPA2P5-201ENST00000452282 464 ntBASIC3□□□□□ -1.93
MSI1O43347 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3□□□□□ -1.93
MSI1O43347 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3□□□□□ -1.93
MSI1O43347 RN7SL499P-201ENST00000481141 276 ntBASIC3□□□□□ -1.93
MSI1O43347 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
MSI1O43347 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3□□□□□ -1.93
MSI1O43347 AC113155.1-201ENST00000511141 769 ntBASIC3□□□□□ -1.93
MSI1O43347 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
MSI1O43347 Y_RNA.718-201ENST00000517110 102 ntBASIC3□□□□□ -1.93
MSI1O43347 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3□□□□□ -1.93
MSI1O43347 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3□□□□□ -1.93
MSI1O43347 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3□□□□□ -1.93
MSI1O43347 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3□□□□□ -1.93
MSI1O43347 LINC00933-203ENST00000559812 219 ntBASIC3□□□□□ -1.93
MSI1O43347 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3□□□□□ -1.93
MSI1O43347 AL133255.1-201ENST00000606374 441 ntBASIC3□□□□□ -1.93
MSI1O43347 MIR6134-201ENST00000617606 109 ntBASIC3□□□□□ -1.93
MSI1O43347 PLCE1P1-201ENST00000622094 305 ntBASIC3□□□□□ -1.93
MSI1O43347 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3□□□□□ -1.93
MSI1O43347 AC010680.1-201ENST00000590024 3590 ntBASIC3□□□□□ -1.93
MSI1O43347 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSI1O43347 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
MSI1O43347 SNORD62.1-201ENST00000362541 86 ntBASIC2.99□□□□□ -1.93
MSI1O43347 SNORA80A-201ENST00000363922 136 ntBASIC2.99□□□□□ -1.93
MSI1O43347 Y_RNA.482-201ENST00000384377 111 ntBASIC2.99□□□□□ -1.93
MSI1O43347 RNU6-601P-201ENST00000384540 107 ntBASIC2.99□□□□□ -1.93
MSI1O43347 RNY4P36-201ENST00000391116 96 ntBASIC2.99□□□□□ -1.93
MSI1O43347 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.99□□□□□ -1.93
MSI1O43347 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
MSI1O43347 U3.37-201ENST00000408528 213 ntBASIC2.99□□□□□ -1.93
MSI1O43347 TOMM20P4-201ENST00000427861 435 ntBASIC2.99□□□□□ -1.93
MSI1O43347 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.99□□□□□ -1.93
MSI1O43347 AC006483.1-201ENST00000487308 313 ntBASIC2.99□□□□□ -1.93
MSI1O43347 AC097462.2-201ENST00000504623 481 ntBASIC2.99□□□□□ -1.93
MSI1O43347 AC116337.1-201ENST00000509680 687 ntBASIC2.99□□□□□ -1.93
MSI1O43347 AC026782.1-201ENST00000512952 449 ntBASIC2.99□□□□□ -1.93
MSI1O43347 RNU6-1016P-201ENST00000516689 94 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms