Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PAX4O43316 AC040958.1-201ENST00000561102 201 ntBASIC3.56□□□□□ -1.84
PAX4O43316 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.56□□□□□ -1.84
PAX4O43316 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.56□□□□□ -1.84
PAX4O43316 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.56□□□□□ -1.84
PAX4O43316 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.56□□□□□ -1.84
PAX4O43316 RPSAP73-201ENST00000614820 330 ntBASIC3.56□□□□□ -1.84
PAX4O43316 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.56□□□□□ -1.84
PAX4O43316 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PAX4O43316 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PAX4O43316 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.56□□□□□ -1.84
PAX4O43316 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PAX4O43316 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PAX4O43316 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PAX4O43316 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.56□□□□□ -1.84
PAX4O43316 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PAX4O43316 C4BPAP1-201ENST00000415474 1893 ntBASIC3.56□□□□□ -1.84
PAX4O43316 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.56□□□□□ -1.84
PAX4O43316 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PAX4O43316 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.55□□□□□ -1.84
PAX4O43316 AC116096.1-201ENST00000566804 2314 ntBASIC3.55□□□□□ -1.84
PAX4O43316 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PAX4O43316 AC010300.1-201ENST00000600671 5134 ntBASIC3.55□□□□□ -1.84
PAX4O43316 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PAX4O43316 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PAX4O43316 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.55□□□□□ -1.84
PAX4O43316 RNA5SP455-201ENST00000365190 119 ntBASIC3.55□□□□□ -1.84
PAX4O43316 SNORA4.2-201ENST00000365313 147 ntBASIC3.55□□□□□ -1.84
PAX4O43316 RNU6-652P-201ENST00000365488 107 ntBASIC3.55□□□□□ -1.84
PAX4O43316 SNORA70.10-201ENST00000384515 134 ntBASIC3.55□□□□□ -1.84
PAX4O43316 MT-TC-201ENST00000387405 66 ntBASIC3.55□□□□□ -1.84
PAX4O43316 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.55□□□□□ -1.84
PAX4O43316 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.55□□□□□ -1.84
PAX4O43316 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.55□□□□□ -1.84
PAX4O43316 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.55□□□□□ -1.84
PAX4O43316 AL451050.1-201ENST00000450126 415 ntBASIC3.55□□□□□ -1.84
PAX4O43316 RPL31P41-201ENST00000477967 372 ntBASIC3.55□□□□□ -1.84
PAX4O43316 COX6CP6-201ENST00000490840 228 ntBASIC3.55□□□□□ -1.84
PAX4O43316 RN7SL441P-201ENST00000492388 296 ntBASIC3.55□□□□□ -1.84
PAX4O43316 COX6B1P5-201ENST00000509843 249 ntBASIC3.55□□□□□ -1.84
PAX4O43316 RNA5SP236-201ENST00000516169 116 ntBASIC3.55□□□□□ -1.84
PAX4O43316 AP006245.2-201ENST00000522004 300 ntBASIC3.55□□□□□ -1.84
PAX4O43316 MIR3691-201ENST00000578066 90 ntBASIC3.55□□□□□ -1.84
PAX4O43316 MIR548Z-201ENST00000584743 97 ntBASIC3.55□□□□□ -1.84
PAX4O43316 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.55□□□□□ -1.84
PAX4O43316 AC019206.1-201ENST00000621938 425 ntBASIC3.55□□□□□ -1.84
PAX4O43316 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.55□□□□□ -1.84
PAX4O43316 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PAX4O43316 OR14L1P-202ENST00000641545 3009 ntBASIC3.55□□□□□ -1.84
PAX4O43316 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.55□□□□□ -1.84
PAX4O43316 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PAX4O43316 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PAX4O43316 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PAX4O43316 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PAX4O43316 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.54□□□□□ -1.84
PAX4O43316 SNURFL-201ENST00000309296 343 ntBASIC3.54□□□□□ -1.84
PAX4O43316 SNORD115-13-201ENST00000363358 82 ntBASIC3.54□□□□□ -1.84
PAX4O43316 SNORD115-16-201ENST00000363887 82 ntBASIC3.54□□□□□ -1.84
PAX4O43316 Y_RNA.243-201ENST00000364481 109 ntBASIC3.54□□□□□ -1.84
PAX4O43316 SNORD87-201ENST00000364849 89 ntBASIC3.54□□□□□ -1.84
PAX4O43316 SNORD115-1-201ENST00000364961 82 ntBASIC3.54□□□□□ -1.84
PAX4O43316 Y_RNA.344-201ENST00000365381 112 ntBASIC3.54□□□□□ -1.84
PAX4O43316 Y_RNA.432-201ENST00000384087 111 ntBASIC3.54□□□□□ -1.84
PAX4O43316 RNA5SP56-201ENST00000410277 118 ntBASIC3.54□□□□□ -1.84
PAX4O43316 RN7SKP213-201ENST00000410746 298 ntBASIC3.54□□□□□ -1.84
PAX4O43316 RNA5SP136-201ENST00000410906 107 ntBASIC3.54□□□□□ -1.84
PAX4O43316 AC093162.1-201ENST00000419682 124 ntBASIC3.54□□□□□ -1.84
PAX4O43316 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.54□□□□□ -1.84
PAX4O43316 NDUFB1P1-201ENST00000435191 180 ntBASIC3.54□□□□□ -1.84
PAX4O43316 AL078601.1-201ENST00000444542 271 ntBASIC3.54□□□□□ -1.84
PAX4O43316 RPSAP50-201ENST00000481955 852 ntBASIC3.54□□□□□ -1.84
PAX4O43316 AL049874.1-201ENST00000489560 388 ntBASIC3.54□□□□□ -1.84
PAX4O43316 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.54□□□□□ -1.84
PAX4O43316 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.54□□□□□ -1.84
PAX4O43316 AC006116.3-201ENST00000592968 361 ntBASIC3.54□□□□□ -1.84
PAX4O43316 U7.3-201ENST00000616123 62 ntBASIC3.54□□□□□ -1.84
PAX4O43316 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PAX4O43316 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.54□□□□□ -1.84
PAX4O43316 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PAX4O43316 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PAX4O43316 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PAX4O43316 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PAX4O43316 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PAX4O43316 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
PAX4O43316 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PAX4O43316 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PAX4O43316 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PAX4O43316 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PAX4O43316 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms