Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TOMM20P4-201ENST00000427861 435 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.05□□□□□ -1.76
SRGAP3O43295 AL136097.1-201ENST00000456945 913 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 LINC01399-202ENST00000458450 244 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.05□□□□□ -1.76
SRGAP3O43295 AC034114.1-201ENST00000520293 285 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 AC084851.1-201ENST00000529105 249 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.05□□□□□ -1.76
SRGAP3O43295 AC012433.1-201ENST00000588916 398 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.05□□□□□ -1.76
SRGAP3O43295 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 MIR6715B-201ENST00000637172 77 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SRGAP3O43295 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.05□□□□□ -1.76
SRGAP3O43295 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.04□□□□□ -1.76
SRGAP3O43295 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SRGAP3O43295 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRGAP3O43295 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRGAP3O43295 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.04□□□□□ -1.76
SRGAP3O43295 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRGAP3O43295 MIR412-201ENST00000362142 91 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 RNU6-212P-201ENST00000362642 104 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 Y_RNA.105-201ENST00000363182 111 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 SNORD27-201ENST00000363981 72 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 RNA5SP387-201ENST00000364226 106 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 RNU6-708P-201ENST00000384217 107 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 Y_RNA.592-201ENST00000410274 109 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 SNORD56-201ENST00000413522 71 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 AL592148.1-201ENST00000413568 445 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 EIF4EP2-201ENST00000422816 654 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.04□□□□□ -1.76
SRGAP3O43295 RPEP5-201ENST00000441137 268 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 AL590664.1-201ENST00000448065 339 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.04□□□□□ -1.76
SRGAP3O43295 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.04□□□□□ -1.76
SRGAP3O43295 AC025465.3-201ENST00000510570 311 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.04□□□□□ -1.76
SRGAP3O43295 RNU6-138P-201ENST00000515952 107 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 RNU6-111P-201ENST00000517179 105 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 AC109329.1-201ENST00000518744 317 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 MIR5680-201ENST00000577577 84 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 MIR5701-3-201ENST00000578890 82 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 MIR5701-1-201ENST00000585138 82 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 MIR5701-2-201ENST00000615634 82 ntBASIC4.04□□□□□ -1.76
SRGAP3O43295 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.04□□□□□ -1.76
SRGAP3O43295 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.04□□□□□ -1.76
SRGAP3O43295 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SRGAP3O43295 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRGAP3O43295 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRGAP3O43295 RNU6-595P-201ENST00000363944 107 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 RNU6-1062P-201ENST00000383908 107 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 MTND3P9-201ENST00000429526 346 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 CST9LP2-201ENST00000437612 320 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.03□□□□□ -1.76
SRGAP3O43295 AC010401.1-201ENST00000463867 348 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.03□□□□□ -1.76
SRGAP3O43295 RN7SL807P-201ENST00000470923 297 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 RNU6-911P-201ENST00000516523 104 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 AC103996.1-201ENST00000555468 102 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 MIR2682-201ENST00000580305 110 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 AP000787.2-201ENST00000604432 568 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.03□□□□□ -1.76
SRGAP3O43295 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRGAP3O43295 AC007496.3-201ENST00000624987 3443 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 AL049555.1-201ENST00000562834 1933 ntBASIC4.03□□□□□ -1.76
SRGAP3O43295 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SRGAP3O43295 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRGAP3O43295 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SRGAP3O43295 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SRGAP3O43295 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRGAP3O43295 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.02□□□□□ -1.77
SRGAP3O43295 RNU1-76P-201ENST00000362903 159 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 SNORD14B-201ENST00000364533 90 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 Y_RNA.478-201ENST00000384358 107 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 U3.19-201ENST00000390893 196 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 RNA5SP494-201ENST00000410653 129 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.02□□□□□ -1.77
SRGAP3O43295 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.02□□□□□ -1.77
SRGAP3O43295 BX679664.1-201ENST00000434429 253 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 GZMAP1-201ENST00000503054 631 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.02□□□□□ -1.77
SRGAP3O43295 AK3P2-201ENST00000507976 429 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.02□□□□□ -1.77
SRGAP3O43295 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.02□□□□□ -1.77
SRGAP3O43295 AC008121.1-201ENST00000603244 268 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 AL355877.2-201ENST00000603670 358 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 AC098479.1-201ENST00000609225 154 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 MIR8076-201ENST00000611401 83 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 AL360181.4-201ENST00000621752 134 ntBASIC4.02□□□□□ -1.77
SRGAP3O43295 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRGAP3O43295 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRGAP3O43295 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
SRGAP3O43295 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms