Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU6-85P-201ENST00000605989 107 ntBASIC2.58□□□□□ -2
TO15178 AC068944.2-201ENST00000610373 403 ntBASIC2.58□□□□□ -2
TO15178 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
TO15178 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TO15178 AL449363.1-201ENST00000617815 186 ntBASIC2.58□□□□□ -2
TO15178 AC138627.2-201ENST00000624202 601 ntBASIC2.58□□□□□ -2
TO15178 U4.7-201ENST00000638126 106 ntBASIC2.58□□□□□ -2
TO15178 MTND5P30-201ENST00000452896 1731 ntBASIC2.58□□□□□ -2
TO15178 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.58□□□□□ -2
TO15178 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
TO15178 AC131280.1-202ENST00000624067 4211 ntBASIC2.57□□□□□ -2
TO15178 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.57□□□□□ -2
TO15178 RPL9P7-201ENST00000330965 580 ntBASIC2.57□□□□□ -2
TO15178 RNU6-843P-201ENST00000384454 104 ntBASIC2.57□□□□□ -2
TO15178 SNORD116-20-201ENST00000384529 92 ntBASIC2.57□□□□□ -2
TO15178 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.57□□□□□ -2
TO15178 MRPS10P2-201ENST00000431226 381 ntBASIC2.57□□□□□ -2
TO15178 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.57□□□□□ -2
TO15178 AC003982.1-202ENST00000469928 248 ntBASIC2.57□□□□□ -2
TO15178 AC117503.1-201ENST00000472241 394 ntBASIC2.57□□□□□ -2
TO15178 AC083904.1-201ENST00000487828 231 ntBASIC2.57□□□□□ -2
TO15178 MTCYBP18-201ENST00000501056 747 ntBASIC2.57□□□□□ -2
TO15178 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
TO15178 RNU6-377P-201ENST00000515965 102 ntBASIC2.57□□□□□ -2
TO15178 SNORA9.3-201ENST00000516383 129 ntBASIC2.57□□□□□ -2
TO15178 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.57□□□□□ -2
TO15178 AP000763.2-201ENST00000540641 163 ntBASIC2.57□□□□□ -2
TO15178 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.57□□□□□ -2
TO15178 AL133241.1-201ENST00000556832 487 ntBASIC2.57□□□□□ -2
TO15178 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.57□□□□□ -2
TO15178 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
TO15178 AC123912.5-201ENST00000605470 343 ntBASIC2.57□□□□□ -2
TO15178 AL357078.3-201ENST00000607528 618 ntBASIC2.57□□□□□ -2
TO15178 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.57□□□□□ -2
TO15178 AL121757.2-201ENST00000611223 313 ntBASIC2.57□□□□□ -2
TO15178 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.57□□□□□ -2
TO15178 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
TO15178 AC010329.5-201ENST00000623497 2174 ntBASIC2.57□□□□□ -2
TO15178 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.56□□□□□ -2
TO15178 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TO15178 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
TO15178 Y_RNA.530-201ENST00000384587 101 ntBASIC2.56□□□□□ -2
TO15178 MIR181A2-201ENST00000384863 110 ntBASIC2.56□□□□□ -2
TO15178 AC074117.2-201ENST00000417130 397 ntBASIC2.56□□□□□ -2
TO15178 USP9YP20-201ENST00000419224 558 ntBASIC2.56□□□□□ -2
TO15178 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.56□□□□□ -2
TO15178 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
TO15178 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
TO15178 NDUFA5P4-201ENST00000436704 385 ntBASIC2.56□□□□□ -2
TO15178 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.56□□□□□ -2
TO15178 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.56□□□□□ -2
TO15178 AP001324.2-201ENST00000461163 319 ntBASIC2.56□□□□□ -2
TO15178 RPL22P13-201ENST00000493291 347 ntBASIC2.56□□□□□ -2
TO15178 MTCYBP40-201ENST00000509390 1135 ntBASIC2.56□□□□□ -2
TO15178 AC091826.1-201ENST00000514065 313 ntBASIC2.56□□□□□ -2
TO15178 SNORA31.6-201ENST00000516241 130 ntBASIC2.56□□□□□ -2
TO15178 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
TO15178 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
TO15178 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
TO15178 RNU6-323P-201ENST00000521915 107 ntBASIC2.56□□□□□ -2
TO15178 AF235103.2-201ENST00000525753 346 ntBASIC2.56□□□□□ -2
TO15178 COPS8P3-201ENST00000526024 482 ntBASIC2.56□□□□□ -2
TO15178 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.56□□□□□ -2
TO15178 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
TO15178 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.56□□□□□ -2
TO15178 AC023824.2-201ENST00000566185 400 ntBASIC2.56□□□□□ -2
TO15178 MIR5692C1-201ENST00000585309 91 ntBASIC2.56□□□□□ -2
TO15178 ELOCP29-201ENST00000588193 334 ntBASIC2.56□□□□□ -2
TO15178 BNIP3P25-201ENST00000596023 559 ntBASIC2.56□□□□□ -2
TO15178 AC096772.1-201ENST00000609146 564 ntBASIC2.56□□□□□ -2
TO15178 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
TO15178 HMGB1P24-202ENST00000615653 685 ntBASIC2.56□□□□□ -2
TO15178 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
TO15178 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
TO15178 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
TO15178 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TO15178 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.55□□□□□ -2
TO15178 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
TO15178 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
TO15178 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TO15178 SNORD113-7-201ENST00000363762 77 ntBASIC2.55□□□□□ -2
TO15178 RNU6-487P-201ENST00000365430 104 ntBASIC2.55□□□□□ -2
TO15178 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
TO15178 RNA5SP21-201ENST00000410917 96 ntBASIC2.55□□□□□ -2
TO15178 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.55□□□□□ -2
TO15178 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.55□□□□□ -2
TO15178 MTND1P2-201ENST00000430604 821 ntBASIC2.55□□□□□ -2
TO15178 AL591043.1-201ENST00000432461 424 ntBASIC2.55□□□□□ -2
TO15178 FABP5P14-201ENST00000437273 393 ntBASIC2.55□□□□□ -2
TO15178 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.55□□□□□ -2
TO15178 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.55□□□□□ -2
TO15178 RPL31P58-201ENST00000469001 379 ntBASIC2.55□□□□□ -2
TO15178 RPL23AP49-201ENST00000492925 468 ntBASIC2.55□□□□□ -2
TO15178 TRBVA-201ENST00000498804 316 ntBASIC2.55□□□□□ -2
TO15178 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.55□□□□□ -2
TO15178 RNU6-358P-201ENST00000516564 75 ntBASIC2.55□□□□□ -2
TO15178 AC090136.1-201ENST00000520009 240 ntBASIC2.55□□□□□ -2
TO15178 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.55□□□□□ -2
TO15178 EIF4BP1-201ENST00000554881 351 ntBASIC2.55□□□□□ -2
TO15178 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms