Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 POLHP1-201ENST00000411806 470 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AL135786.1-201ENST00000415892 214 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 Z98742.3-201ENST00000418637 326 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.81□□□□□ -1.96
ATP2A1O14983 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.81□□□□□ -1.96
ATP2A1O14983 AC009414.1-201ENST00000427200 443 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 TOMM20P4-201ENST00000427861 435 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AL356320.1-201ENST00000429616 163 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 USP9YP28-201ENST00000435142 589 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 RNU6-1208P-201ENST00000459588 107 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.81□□□□□ -1.96
ATP2A1O14983 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.81□□□□□ -1.96
ATP2A1O14983 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.81□□□□□ -1.96
ATP2A1O14983 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.81□□□□□ -1.96
ATP2A1O14983 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.81□□□□□ -1.96
ATP2A1O14983 MIR3124-201ENST00000582636 67 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.81□□□□□ -1.96
ATP2A1O14983 VN1R80P-201ENST00000597126 338 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AL355877.2-201ENST00000603670 358 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 RNU6-89P-201ENST00000606519 100 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AC092807.2-201ENST00000609367 243 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.81□□□□□ -1.96
ATP2A1O14983 AC103705.1-201ENST00000619013 241 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 SCARNA4-202ENST00000625402 129 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.81□□□□□ -1.96
ATP2A1O14983 MIR1291-201ENST00000627649 87 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 MIR3662-201ENST00000637030 95 ntBASIC2.81□□□□□ -1.96
ATP2A1O14983 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
ATP2A1O14983 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
ATP2A1O14983 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
ATP2A1O14983 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
ATP2A1O14983 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
ATP2A1O14983 RNU6-522P-201ENST00000364497 107 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 RNA5SP219-201ENST00000390940 113 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 RNA5SP210-201ENST00000391034 120 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATP2A1O14983 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC016831.2-201ENST00000417179 352 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.8□□□□□ -1.96
ATP2A1O14983 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AL161651.1-201ENST00000440882 223 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 FTH1P25-201ENST00000447665 469 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 AL513124.1-201ENST00000450410 614 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC092001.1-201ENST00000453012 261 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 HMGN2P26-201ENST00000463169 339 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.8□□□□□ -1.96
ATP2A1O14983 AC113155.1-201ENST00000511141 769 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 RNU6-1038P-201ENST00000516516 104 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 SNORA25.17-201ENST00000517184 124 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 CYCSP27-201ENST00000527643 293 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 AC092747.3-201ENST00000603769 301 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 AC121333.1-201ENST00000567488 2709 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 AC010889.1-201ENST00000566193 2666 ntBASIC2.8□□□□□ -1.96
ATP2A1O14983 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.79□□□□□ -1.96
ATP2A1O14983 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATP2A1O14983 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
ATP2A1O14983 RNU6-266P-201ENST00000364225 107 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 Y_RNA.324-201ENST00000365165 102 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 RNU6-1280P-201ENST00000365211 107 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 RNA5SP425-201ENST00000410336 112 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 RNU2-25P-201ENST00000411041 191 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 PGBD4P6-201ENST00000421501 610 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.79□□□□□ -1.96
ATP2A1O14983 MRPS10P2-201ENST00000431226 381 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AL139415.2-201ENST00000431968 163 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AC104389.3-201ENST00000445629 235 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 HIGD1AP2-201ENST00000446367 280 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AC233279.1-201ENST00000455300 423 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 YWHAEP4-201ENST00000505390 198 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.79□□□□□ -1.96
ATP2A1O14983 AF213884.2-201ENST00000510417 903 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 SNORA14.1-201ENST00000516113 141 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 RN7SKP40-201ENST00000517211 242 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AC069113.1-201ENST00000517763 267 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 CKS1BP7-201ENST00000522230 235 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AP004607.1-201ENST00000524456 203 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.79□□□□□ -1.96
ATP2A1O14983 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.79□□□□□ -1.96
ATP2A1O14983 AC002044.1-201ENST00000606707 158 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
ATP2A1O14983 UCA1.1-201ENST00000620952 75 ntBASIC2.79□□□□□ -1.96
ATP2A1O14983 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATP2A1O14983 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATP2A1O14983 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATP2A1O14983 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
ATP2A1O14983 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATP2A1O14983 Y_RNA.157-201ENST00000363638 102 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 Y_RNA.167-201ENST00000363735 109 ntBASIC2.78□□□□□ -1.96
ATP2A1O14983 RNU4-26P-201ENST00000410270 107 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms