Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.54□□□□□ -2
O00370 RNU7-180P-201ENST00000459240 63 ntBASIC2.54□□□□□ -2
O00370 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.54□□□□□ -2
O00370 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.54□□□□□ -2
O00370 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
O00370 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
O00370 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.54□□□□□ -2
O00370 RNU6-835P-201ENST00000516974 104 ntBASIC2.54□□□□□ -2
O00370 AC109635.3-201ENST00000529536 185 ntBASIC2.54□□□□□ -2
O00370 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.54□□□□□ -2
O00370 AC107304.1-201ENST00000604229 296 ntBASIC2.54□□□□□ -2
O00370 U2.17-201ENST00000611454 95 ntBASIC2.54□□□□□ -2
O00370 AL449363.1-201ENST00000617815 186 ntBASIC2.54□□□□□ -2
O00370 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.54□□□□□ -2
O00370 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.54□□□□□ -2
O00370 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
O00370 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
O00370 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
O00370 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
O00370 RNU6-384P-201ENST00000364900 104 ntBASIC2.53□□□□□ -2
O00370 Y_RNA.450-201ENST00000384198 113 ntBASIC2.53□□□□□ -2
O00370 Y_RNA.453-201ENST00000384223 109 ntBASIC2.53□□□□□ -2
O00370 AL133475.1-201ENST00000404414 305 ntBASIC2.53□□□□□ -2
O00370 BTF3P7-201ENST00000407097 488 ntBASIC2.53□□□□□ -2
O00370 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.53□□□□□ -2
O00370 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.53□□□□□ -2
O00370 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.53□□□□□ -2
O00370 AC012308.1-201ENST00000451232 178 ntBASIC2.53□□□□□ -2
O00370 AL139109.1-201ENST00000455491 297 ntBASIC2.53□□□□□ -2
O00370 RPL21P99-201ENST00000480369 423 ntBASIC2.53□□□□□ -2
O00370 CCDC34P1-201ENST00000507441 517 ntBASIC2.53□□□□□ -2
O00370 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.53□□□□□ -2
O00370 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
O00370 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
O00370 AC104136.1-201ENST00000512969 394 ntBASIC2.53□□□□□ -2
O00370 RNU2-69P-201ENST00000516061 100 ntBASIC2.53□□□□□ -2
O00370 SNORA31.6-201ENST00000516241 130 ntBASIC2.53□□□□□ -2
O00370 Y_RNA.687-201ENST00000516558 91 ntBASIC2.53□□□□□ -2
O00370 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.53□□□□□ -2
O00370 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.53□□□□□ -2
O00370 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.53□□□□□ -2
O00370 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
O00370 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.53□□□□□ -2
O00370 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.53□□□□□ -2
O00370 AC002044.1-201ENST00000606707 158 ntBASIC2.53□□□□□ -2
O00370 AC090517.2-201ENST00000614966 680 ntBASIC2.53□□□□□ -2
O00370 U4.5-201ENST00000617137 123 ntBASIC2.53□□□□□ -2
O00370 AC026585.1-201ENST00000619582 524 ntBASIC2.53□□□□□ -2
O00370 AL031601.2-202ENST00000622650 282 ntBASIC2.53□□□□□ -2
O00370 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.53□□□□□ -2
O00370 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
O00370 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
O00370 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.52□□□□□ -2.01
O00370 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.52□□□□□ -2.01
O00370 RNU4-20P-201ENST00000365601 151 ntBASIC2.52□□□□□ -2.01
O00370 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
O00370 XGY1-201ENST00000381172 446 ntBASIC2.52□□□□□ -2.01
O00370 RNU6-19P-201ENST00000384718 107 ntBASIC2.52□□□□□ -2.01
O00370 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
O00370 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
O00370 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.52□□□□□ -2.01
O00370 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
O00370 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.52□□□□□ -2.01
O00370 UBE2V1P8-201ENST00000437166 265 ntBASIC2.52□□□□□ -2.01
O00370 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
O00370 AC116655.1-201ENST00000508324 901 ntBASIC2.52□□□□□ -2.01
O00370 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
O00370 MIR3124-201ENST00000582636 67 ntBASIC2.52□□□□□ -2.01
O00370 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.52□□□□□ -2.01
O00370 AC010525.2-201ENST00000590920 195 ntBASIC2.52□□□□□ -2.01
O00370 AC092747.3-201ENST00000603769 301 ntBASIC2.52□□□□□ -2.01
O00370 AC116312.1-201ENST00000606841 314 ntBASIC2.52□□□□□ -2.01
O00370 Z82243.1-201ENST00000609432 473 ntBASIC2.52□□□□□ -2.01
O00370 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
O00370 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
O00370 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
O00370 AC022418.1-201ENST00000624118 445 ntBASIC2.52□□□□□ -2.01
O00370 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
O00370 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
O00370 MTND4P5-201ENST00000435821 1374 ntBASIC2.51□□□□□ -2.01
O00370 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
O00370 OR4G1P-203ENST00000641984 1631 ntBASIC2.51□□□□□ -2.01
O00370 AL139276.1-201ENST00000311910 1001 ntBASIC2.51□□□□□ -2.01
O00370 RNU6-877P-201ENST00000383868 107 ntBASIC2.51□□□□□ -2.01
O00370 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
O00370 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.51□□□□□ -2.01
O00370 RNU6-648P-201ENST00000410190 107 ntBASIC2.51□□□□□ -2.01
O00370 Y_RNA.599-201ENST00000410489 109 ntBASIC2.51□□□□□ -2.01
O00370 OR9R1P-201ENST00000412200 877 ntBASIC2.51□□□□□ -2.01
O00370 AL353621.1-201ENST00000418219 243 ntBASIC2.51□□□□□ -2.01
O00370 ZNF885P-201ENST00000420174 1098 ntBASIC2.51□□□□□ -2.01
O00370 PTGES3P4-201ENST00000426243 356 ntBASIC2.51□□□□□ -2.01
O00370 HMGB1P31-201ENST00000437242 427 ntBASIC2.51□□□□□ -2.01
O00370 MTND3P16-201ENST00000452205 344 ntBASIC2.51□□□□□ -2.01
O00370 DYNLL1P5-201ENST00000467158 270 ntBASIC2.51□□□□□ -2.01
O00370 MTCO3P38-201ENST00000468910 766 ntBASIC2.51□□□□□ -2.01
O00370 AC011005.2-201ENST00000487324 359 ntBASIC2.51□□□□□ -2.01
O00370 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.51□□□□□ -2.01
O00370 RN7SL636P-201ENST00000497504 294 ntBASIC2.51□□□□□ -2.01
O00370 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms