Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RN7SKP158-201ENST00000410453 326 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 RNU6-607P-201ENST00000411283 108 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AL356010.1-201ENST00000456364 102 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 RNU7-63P-201ENST00000459054 62 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 AC140059.1-201ENST00000489238 361 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.13□□□□□ -2.07
PDLIM1O00151 HMGB1P29-201ENST00000505659 499 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 LRRC34P2-201ENST00000514850 553 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 RNU6-405P-201ENST00000516637 110 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AC079598.5-201ENST00000547460 117 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 CR383656.8-201ENST00000549046 145 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 BNIP3P6-201ENST00000549284 499 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM1O00151 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AC087683.1-201ENST00000591187 441 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.13□□□□□ -2.07
PDLIM1O00151 AL162373.1-201ENST00000620433 407 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PDLIM1O00151 MIR1291-201ENST00000627649 87 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.13□□□□□ -2.07
PDLIM1O00151 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.12□□□□□ -2.07
PDLIM1O00151 RNU6-1103P-201ENST00000384150 107 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SNORD70.1-201ENST00000391007 85 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC068050.1-201ENST00000394891 380 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SUMO2P12-201ENST00000405924 140 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 RNU4-55P-201ENST00000410731 137 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.12□□□□□ -2.07
PDLIM1O00151 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
PDLIM1O00151 MTCO2P18-201ENST00000457151 658 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SNRPFP3-201ENST00000457792 225 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SCARNA18-201ENST00000459004 134 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.12□□□□□ -2.07
PDLIM1O00151 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 CKS1BP2-201ENST00000497342 240 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.12□□□□□ -2.07
PDLIM1O00151 AC108078.1-201ENST00000508073 725 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 MTCO3P7-201ENST00000510008 774 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 RPL23AP94-201ENST00000512518 302 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SNORA43.2-201ENST00000516652 128 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.12□□□□□ -2.07
PDLIM1O00151 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC105137.2-201ENST00000569073 466 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 MTATP6P3-201ENST00000581686 676 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC012507.3-201ENST00000603556 477 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AL391646.1-201ENST00000603860 190 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC021646.1-201ENST00000605469 484 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC093788.1-201ENST00000609356 927 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 Z99129.1-201ENST00000612510 255 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AL354950.2-201ENST00000617939 290 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 DUXAP9-208ENST00000622815 614 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC244517.12-201ENST00000623581 663 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 AC005609.4-201ENST00000625071 447 ntBASIC2.12□□□□□ -2.07
PDLIM1O00151 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.12□□□□□ -2.07
PDLIM1O00151 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
PDLIM1O00151 RNA5SP125-201ENST00000364843 120 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 Y_RNA.324-201ENST00000365165 102 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 RNU6-434P-201ENST00000384376 107 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 RNU6-843P-201ENST00000384454 104 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 CYCSP33-201ENST00000414485 327 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 MTCYBP8-201ENST00000422855 651 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 RPS3AP44-201ENST00000425466 790 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.11□□□□□ -2.07
PDLIM1O00151 AL669831.1-202ENST00000428504 417 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 USP9YP14-201ENST00000430663 563 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.11□□□□□ -2.07
PDLIM1O00151 GTF2IP13-201ENST00000438487 386 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AC124916.1-201ENST00000444020 547 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.11□□□□□ -2.07
PDLIM1O00151 GMFBP1-201ENST00000467831 427 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 HMGB3P17-201ENST00000504195 649 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.11□□□□□ -2.07
PDLIM1O00151 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
PDLIM1O00151 AC024909.2-201ENST00000553035 286 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.11□□□□□ -2.07
PDLIM1O00151 AL133241.1-201ENST00000556832 487 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AC009063.1-201ENST00000563342 702 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AC004223.2-201ENST00000590309 544 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.11□□□□□ -2.07
PDLIM1O00151 AL161423.1-201ENST00000613700 262 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 RMST_4.1-201ENST00000616886 107 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 MIR6766-201ENST00000622641 72 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 IGHVIII-44-202ENST00000636235 289 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDLIM1O00151 AC006020.1-201ENST00000420179 1854 ntBASIC2.11□□□□□ -2.07
PDLIM1O00151 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.1□□□□□ -2.07
PDLIM1O00151 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms