Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC093899.1-201ENST00000457984 376 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RPS29P23-201ENST00000458635 123 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC112771.1-201ENST00000463581 102 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RPL36AP48-201ENST00000485521 314 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 MTCYBP43-201ENST00000513621 740 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RNU7-51P-201ENST00000516560 62 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 SNORA31.23-201ENST00000517219 133 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 MIR1273C-201ENST00000578669 77 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AL139418.1-201ENST00000613613 177 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC009878.1-201ENST00000621819 340 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AL136313.1-201ENST00000624804 202 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 ICE2P2-201ENST00000483823 2787 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 Y_RNA.46-201ENST00000362695 102 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RNU6-748P-201ENST00000384648 107 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 MT-TH-201ENST00000387441 69 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 CIR1P3-201ENST00000405137 479 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 FTH1P12-201ENST00000432137 551 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 MTND2P24-201ENST00000453434 806 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RPS27P26-201ENST00000494583 239 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 SMURF2P1-201ENST00000514992 481 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RNU2-19P-201ENST00000517288 84 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC023538.1-201ENST00000534576 736 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 NACAP3-201ENST00000552100 481 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AL157871.3-201ENST00000557231 293 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AL512605.2-201ENST00000592972 256 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC008749.1-201ENST00000597650 306 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AL109918.3-201ENST00000603072 338 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC112187.2-201ENST00000604345 283 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC091965.4-201ENST00000607691 587 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 TUSC7.1-201ENST00000610969 165 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC092125.1-201ENST00000562568 1995 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RNU6-529P-201ENST00000363383 104 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 RNU6-501P-201ENST00000364072 100 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 RNU6-19P-201ENST00000384718 107 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC004383.1-201ENST00000438135 289 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AL121769.1-201ENST00000469473 401 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MRPS17P9-201ENST00000511924 393 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 RNA5SP112-201ENST00000515937 99 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AP001372.4-201ENST00000524889 472 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MIR5571-201ENST00000577998 113 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC005498.1-201ENST00000592125 465 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AL713866.2-201ENST00000603579 219 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 NUTF2P8-201ENST00000604593 363 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC025588.2-201ENST00000604851 466 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC107214.2-201ENST00000608204 634 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC108747.1-201ENST00000609508 535 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 HMGB1P24-202ENST00000615653 685 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC007494.3-201ENST00000624660 743 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC007671.2-201ENST00000637344 619 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC006927.3-201ENST00000638789 384 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 RNU6-898P-201ENST00000365627 104 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 SEPT2P1-201ENST00000419651 180 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MTND6P13-201ENST00000443510 523 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MTND3P7-201ENST00000474435 343 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC010486.2-201ENST00000505572 483 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MRPS33P3-201ENST00000513456 322 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 ADI1P3-201ENST00000549509 470 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 MRPS36P5-201ENST00000551909 298 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AC121334.2-201ENST00000605387 271 ntBASIC0.91□□□□□ -2.26
COL6A6A6NMZ7 AL021997.1-201ENST00000605757 193 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms