Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL159972.1-201ENST00000625150 448 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AL590396.4-201ENST00000636779 956 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6-743P-201ENST00000364151 106 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 RNU1-96P-201ENST00000364163 162 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 MIR520A-201ENST00000384862 85 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 DHFRP6-201ENST00000401776 268 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 MTND4P20-201ENST00000424125 869 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC005345.1-201ENST00000431868 217 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 ZNF965P-201ENST00000432501 817 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 ATP5J2P3-201ENST00000451550 258 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC113410.1-201ENST00000505029 247 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 SNORA31.4-201ENST00000516049 129 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC090330.1-201ENST00000588646 764 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC012065.4-201ENST00000602445 679 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 AC034229.4-201ENST00000607861 441 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 MIR4275-201ENST00000636486 87 ntBASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CPSF4LA6NMK7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RNU4-67P-201ENST00000364569 141 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RNU6-45P-201ENST00000384471 107 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 MIR216A-201ENST00000385063 110 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 SNORD89-201ENST00000390981 114 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AF228730.1-201ENST00000397972 663 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AL008629.1-201ENST00000438615 184 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RPEP5-201ENST00000441137 268 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 DAP3P1-201ENST00000441522 278 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RPS27AP8-201ENST00000452665 445 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RPS26P45-201ENST00000471748 340 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC048334.1-201ENST00000477975 159 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC022493.2-201ENST00000506122 481 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC093012.1-202ENST00000549403 582 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC060771.1-201ENST00000582031 164 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC004853.1-201ENST00000604902 698 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 MIR98-201ENST00000606724 119 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC100812.1-201ENST00000607622 580 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 MIR6718-201ENST00000616153 80 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC130454.1-201ENST00000622948 401 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC093648.1-201ENST00000623546 606 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC120349.3-201ENST00000624377 529 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 AC106730.3-201ENST00000624568 641 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 ZNF849P-201ENST00000594711 1566 ntBASIC-0.03□□□□□ -2.41
CPSF4LA6NMK7 SNORA63.3-201ENST00000362682 132 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 RPS3AP37-201ENST00000419176 745 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC099677.2-201ENST00000436385 175 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC233266.1-201ENST00000454518 96 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 RNU2-53P-201ENST00000516257 147 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 RN7SKP256-201ENST00000517201 314 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 RNU6-840P-201ENST00000517275 65 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC104417.1-201ENST00000523974 751 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC008127.2-201ENST00000549925 1075 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 HMGB1P33-201ENST00000563485 527 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC073410.2-201ENST00000603240 332 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AL590229.1-201ENST00000603497 542 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AL356157.2-201ENST00000605122 111 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC242852.1-201ENST00000612151 96 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC126177.8-201ENST00000618339 1015 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 AC244015.1-201ENST00000622301 99 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 MIR1248-201ENST00000629190 106 ntBASIC-0.04□□□□□ -2.42
CPSF4LA6NMK7 SEC63P2-201ENST00000503863 1939 ntBASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 SNORA63D-201ENST00000364359 132 ntBASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 RNU4-45P-201ENST00000365469 141 ntBASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 RNU6-331P-201ENST00000384724 107 ntBASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 MIR186-201ENST00000384988 86 ntBASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.05□□□□□ -2.42
CPSF4LA6NMK7 OR6C5P-201ENST00000452388 923 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms