Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MIR1244-2-201ENST00000636449 85 ntBASIC2.59□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR1244-4-202ENST00000636813 85 ntBASIC2.59□□□□□ -1.99
IGHV4-28A0A0C4DH34 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
IGHV4-28A0A0C4DH34 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
IGHV4-28A0A0C4DH34 GABRG2-229ENST00000641017 3628 ntBASIC2.59□□□□□ -2
IGHV4-28A0A0C4DH34 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
IGHV4-28A0A0C4DH34 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
IGHV4-28A0A0C4DH34 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.59□□□□□ -2
IGHV4-28A0A0C4DH34 AC091152.2-201ENST00000591628 2569 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC233981.2-201ENST00000611524 1614 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RNA5SP119-201ENST00000362715 117 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RNY3P11-201ENST00000364153 102 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-487P-201ENST00000365430 104 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-1032P-201ENST00000384100 107 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-738P-201ENST00000384531 106 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AL138885.1-201ENST00000405921 675 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC009414.1-201ENST00000427200 443 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC092423.1-201ENST00000430165 186 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MTCO3P29-201ENST00000432119 779 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC004383.1-201ENST00000438135 289 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RPL39P29-201ENST00000447779 157 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 PRSS3P4-201ENST00000453323 162 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AL441985.1-201ENST00000457727 251 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC110768.1-201ENST00000509222 400 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 SNORA25.10-201ENST00000515926 124 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 RN7SKP83-201ENST00000516512 178 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 HSPE1P4-201ENST00000550617 308 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MIR5701-3-201ENST00000578890 82 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MIR5701-1-201ENST00000585138 82 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 KLKP1-201ENST00000595979 403 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AL391813.1-201ENST00000603098 260 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MIR5701-2-201ENST00000615634 82 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MIR8058-201ENST00000615737 89 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AC084757.4-201ENST00000616350 526 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 AP003355.3-201ENST00000623465 114 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MTND5P1-201ENST00000445440 1375 ntBASIC2.58□□□□□ -2
IGHV4-28A0A0C4DH34 MAPK10-322ENST00000641485 4530 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RNU1-115P-201ENST00000365329 160 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.504-201ENST00000384481 104 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-700P-201ENST00000391043 107 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RNA5SP354-201ENST00000391247 136 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 PTMAP5-201ENST00000393073 333 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 MRPL42P3-201ENST00000401492 326 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 MTHFD2P2-201ENST00000407725 247 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 MIR1183-201ENST00000408856 89 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RNA5SP390-201ENST00000410191 113 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RNA5SP494-201ENST00000410653 129 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC113618.1-201ENST00000416747 285 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RPL23AP95-201ENST00000426806 265 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 CYCSP4-201ENST00000429682 331 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL513124.1-201ENST00000450410 614 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL136097.1-201ENST00000456945 913 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RPL7P49-201ENST00000471402 708 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 HMGN1P10-201ENST00000474557 553 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RPS26P21-201ENST00000475397 348 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC104564.1-201ENST00000493028 407 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-1137P-201ENST00000517073 99 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL590705.4-201ENST00000532209 134 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 MIR4644-201ENST00000579929 84 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 MIR3944-201ENST00000581277 108 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL137843.1-201ENST00000605078 385 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AC116312.1-201ENST00000606841 314 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 AL355802.3-201ENST00000607571 545 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 U4.6-201ENST00000621618 127 ntBASIC2.57□□□□□ -2
IGHV4-28A0A0C4DH34 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
IGHV4-28A0A0C4DH34 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms