Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 NEFMP1-201ENST00000443423 1006 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 PGBD4P5-201ENST00000445958 426 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC010631.1-201ENST00000474150 156 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 SNORA3.4-201ENST00000515969 96 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC093012.1-202ENST00000549403 582 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC136618.2-201ENST00000575091 400 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AL512605.2-201ENST00000592972 256 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 DPPA3P3-201ENST00000603842 430 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 AC093648.1-201ENST00000623546 606 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 U6.99-201ENST00000637524 83 ntBASIC0.55□□□□□ -2.32
TRAV17A0A0B4J275 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 SNORD114-6-201ENST00000364393 72 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 RNU6-1207P-201ENST00000384343 107 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 MIR193B-201ENST00000384907 83 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 AL589872.1-201ENST00000426602 288 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 AC126365.2-201ENST00000580630 379 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 AC012065.4-201ENST00000602445 679 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 AL450270.1-201ENST00000606160 391 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 uc_338.15-201ENST00000615470 191 ntBASIC0.54□□□□□ -2.32
TRAV17A0A0B4J275 RNU6-97P-201ENST00000363387 104 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 SNORA25-201ENST00000384384 134 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 RNU6-16P-201ENST00000384385 107 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 RNU6-160P-201ENST00000384591 107 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AL096829.2-201ENST00000446582 742 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MRPL42P4-201ENST00000453267 443 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AL583843.1-201ENST00000456070 346 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 RPL30P6-201ENST00000475925 342 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AC023632.1-201ENST00000518463 375 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AP001189.2-201ENST00000527320 189 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AL356057.1-201ENST00000533798 831 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AC023538.1-201ENST00000534576 736 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AL512310.8-201ENST00000550183 120 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MIR4782-201ENST00000577987 79 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MIR4661-201ENST00000582720 75 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MZT1P2-201ENST00000604387 248 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MIR1248-201ENST00000629190 106 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 AC099654.5-201ENST00000636479 350 ntBASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV17A0A0B4J275 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 RNU4-41P-201ENST00000364426 143 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 Y_RNA.255-201ENST00000364581 97 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-432P-201ENST00000384196 109 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-952P-201ENST00000391164 108 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 RPL23AP32-201ENST00000395315 459 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 MRPL35P1-201ENST00000404272 572 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 RNU4-27P-201ENST00000410889 139 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 MTND2P20-201ENST00000440805 661 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 GXYLT1P1-201ENST00000446657 490 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 HMGN1P13-201ENST00000505795 138 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC104806.1-201ENST00000508720 308 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC093809.1-201ENST00000509155 340 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 ACA64.5-201ENST00000516207 127 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 SCARNA16.2-201ENST00000516520 172 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-965P-201ENST00000516721 96 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC006518.2-201ENST00000542513 940 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 MIR3937-201ENST00000580135 106 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC006270.3-201ENST00000605967 1036 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 BX284668.6-201ENST00000606899 438 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC093788.1-201ENST00000609356 927 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC243773.3-201ENST00000613270 256 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AL590240.4-201ENST00000616908 390 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 MIR8065-201ENST00000620577 100 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AC010487.4-201ENST00000637027 61 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 AL589743.1-201ENST00000551932 2712 ntBASIC0.52□□□□□ -2.33
TRAV17A0A0B4J275 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms