Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC084364.2-201ENST00000546924 395 ntBASIC0.82□□□□□ -2.28
TRAV1-1A0A0B4J248 AC002400.1-201ENST00000569310 726 ntBASIC0.82□□□□□ -2.28
TRAV1-1A0A0B4J248 AL022154.1-201ENST00000604698 785 ntBASIC0.82□□□□□ -2.28
TRAV1-1A0A0B4J248 BCRP9-201ENST00000605312 388 ntBASIC0.82□□□□□ -2.28
TRAV1-1A0A0B4J248 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV1-1A0A0B4J248 AC126544.2-201ENST00000625174 749 ntBASIC0.82□□□□□ -2.28
TRAV1-1A0A0B4J248 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 SNORD114-6-201ENST00000364393 72 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 SNORD1A-201ENST00000364968 72 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-1222P-201ENST00000384615 107 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 TXNL1P1-201ENST00000429528 554 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AL591212.2-201ENST00000433923 257 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 LARP1BP3-201ENST00000437229 869 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 NDUFB1P2-201ENST00000449477 176 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 OR2A41P-201ENST00000473586 105 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 SUMO2P5-201ENST00000506790 245 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC012414.6-201ENST00000568241 401 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC005786.1-201ENST00000588553 154 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 VN1R82P-201ENST00000601481 356 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 AC131235.4-201ENST00000609288 620 ntBASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TRAV1-1A0A0B4J248 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-23P-201ENST00000363283 107 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-769P-201ENST00000384407 104 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-160P-201ENST00000384591 107 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-296P-201ENST00000384608 107 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-298P-201ENST00000390888 96 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 Y_RNA.623-201ENST00000411128 95 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 C8orf59P1-201ENST00000429930 303 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 GDI2P2-201ENST00000445131 608 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AL583843.1-201ENST00000456070 346 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AL139824.2-201ENST00000458731 1095 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RPL30P7-201ENST00000479312 323 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RPL26P26-201ENST00000480251 434 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AC108078.1-201ENST00000508073 725 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AC109445.1-201ENST00000512356 383 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AP000907.2-201ENST00000530827 353 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 LRRC6P1-201ENST00000532188 885 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 RAB11AP2-201ENST00000545905 639 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AC137800.2-201ENST00000574375 120 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AC078795.2-201ENST00000602835 1252 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 MIR15A-201ENST00000607334 83 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AL121895.2-201ENST00000619558 447 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 AC068205.3-201ENST00000636385 468 ntBASIC0.8□□□□□ -2.28
TRAV1-1A0A0B4J248 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-511P-201ENST00000363496 107 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 Y_RNA.164-201ENST00000363709 102 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 Y_RNA.192-201ENST00000363977 102 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-321P-201ENST00000410912 106 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 VPS26BP1-201ENST00000417155 755 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC009518.2-201ENST00000418056 731 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RPS27P16-201ENST00000425758 201 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AL627311.1-201ENST00000431514 115 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RPS15AP10-201ENST00000432472 382 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RPS25P9-201ENST00000435591 252 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 UBE2V1P8-201ENST00000437166 265 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC027119.1-201ENST00000440877 241 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 CALM1P1-201ENST00000442082 433 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RPL39P29-201ENST00000447779 157 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RPL23AP35-201ENST00000451906 501 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU1-131P-201ENST00000458943 161 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 TOMM22P6-201ENST00000465035 409 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC132942.1-201ENST00000486753 483 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RPL36AP21-201ENST00000490372 323 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC009646.1-201ENST00000510455 318 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 RNU6-677P-201ENST00000516914 101 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AP003122.4-201ENST00000530980 758 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC019288.1-201ENST00000557918 224 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC009712.1-201ENST00000564938 316 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 MIR4781-201ENST00000585250 76 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC022022.2-201ENST00000602989 360 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC130324.3-201ENST00000614165 542 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 uc_338.12-201ENST00000616344 181 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC006386.1-201ENST00000619436 415 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AL121890.5-201ENST00000620848 304 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 AC091895.1-201ENST00000624494 256 ntBASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV1-1A0A0B4J248 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms